Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ixodes_20scapularis_20[refseq_20GCF_5F000208615.1_202008-04-18] 369,492 sequences; 1,765,382,190 total letters Query= AAMG01001138.1 Length=202 Score E Sequences producing significant alignments: (Bits) Value seq165536 127 2e-27 >seq165536 Length=484117 Score = 127 bits (140), Expect = 2e-27 Identities = 115/149 (77%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 23 CGGGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTG 82 |||||||||| |||| | ||| || | || |||||||||| || | | ||||||| ||| Sbjct 12743 CGGGGTCTTTCCGTCTGACCGCAGGAACTCCGCATCTTCACGGAGAATTCAATTTCGCTG 12802 Query 83 AGCTCACGGTTGAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCC 142 || | | ||||||| ||| |||||||||| ||||||||||||||| Sbjct 12803 AGTCGATACTGGAGACAGTGGGGAAATCGTTACGCCATTCGTGCGGGTCGGAACTTACCC 12862 Query 143 GACAAGGAATTTCGCTACCTTAGGACCGT 171 ||||||||||||||||||||||||||||| Sbjct 12863 GACAAGGAATTTCGCTACCTTAGGACCGT 12891 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 545241322908