Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ixodes_20scapularis_20[refseq_20GCF_5F000208615.1_202008-04-18] 369,492 sequences; 1,765,382,190 total letters Query= AAMG01001432.1 Length=344 Score E Sequences producing significant alignments: (Bits) Value seq165536 273 4e-71 seq218279 192 1e-46 >seq165536 Length=484117 Score = 273 bits (302), Expect = 4e-71 Identities = 239/300 (80%), Gaps = 17/300 (6%) Strand=Plus/Plus Query 7 GCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAGGAGTCT 66 |||| |||||| |||| |||||||| |||||| ||||||||||||||||||||||||||| Sbjct 146800 GCTGGATCAGGCTTTCGCCCATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCT 146859 Query 67 GGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGATCGTCGG 126 ||||||||||||||||||| |||||| | ||| |||||||| || ||||| ||||||||| Sbjct 146860 GGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCTCTCAGACCAGCTACAGATCGTCGG 146919 Query 127 CTTGGTGGGCTATTATCTCACCAACTACCTAATCGGCCGCGAGCCCATCTTTCAGCGATA 186 ||||||| || ||| ||||||||| |||||||| | |||| || |||| ||||||||| Sbjct 146920 CTTGGTGAGCCGTTACCTCACCAACGACCTAATCTGACGCGGGCTCATCCATCAGCGATA 146979 Query 187 AATCTTTGGTCAAAGAATGATGCCATCCTCTGACATTATGCGGTATTAGCGTTCGTTTCC 246 ||||||| | ||| || | ||| |||||||||| || |||| Sbjct 146980 AATCTTT----------------CTTCCGTAGAGAATATACGGTATTAGCTTTTATTTCT 147023 Query 247 AAACGTTATTCCACTCTGAAAGGCAGGTTGCTCACGTGTTACTCACCCGTCCGCCACTAA 306 ||| |||||||| |||| || || || | ||||||||||||||||||| |||||||| Sbjct 147024 AAAAGTTATTCCGTACTGATGGGTAGATT-CCCACGTGTTACTCACCCGTCTGCCACTAA 147082 >seq218279 Length=1762 Score = 192 bits (212), Expect = 1e-46 Identities = 135/154 (88%), Gaps = 0/154 (0%) Strand=Plus/Minus Query 7 GCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAGGAGTCT 66 |||| |||||||||||||||||||| ||| || ||||||||||||||||||||||||||| Sbjct 1520 GCTGGATCAGGGTTTCCCCCATTGTCCAAAATTCCCCACTGCTGCCTCCCGTAGGAGTCT 1461 Query 67 GGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGATCGTCGG 126 || |||||||||||| ||| |||||| | || |||||||| || ||||| ||||||||| Sbjct 1460 GGACCGTGTCTCAGTTCCAGTGTGGCTGATCGTCCTCTCAGACCAGCTACTGATCGTCGG 1401 Query 127 CTTGGTGGGCTATTATCTCACCAACTACCTAATC 160 |||||| ||| ||| | |||||||||||||||| Sbjct 1400 CTTGGTAGGCCTTTACCCCACCAACTACCTAATC 1367 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 994710991872