Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ixodes_20scapularis_20[refseq_20GCF_5F000208615.1_202008-04-18]
369,492 sequences; 1,765,382,190 total letters
Query= AAMG01001844.1
Length=290
Score E
Sequences producing significant alignments: (Bits) Value
seq165536 190 3e-46
seq218279 111 3e-22
seq337855 91.5 2e-16
>seq165536
Length=484117
Score = 190 bits (210), Expect = 3e-46
Identities = 216/290 (74%), Gaps = 0/290 (0%)
Strand=Plus/Plus
Query 1 CCCACGCTTTCGCGCCTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGT 60
|||||||||||| || | |||||||||| | |||| ||||||||||||| |||||
Sbjct 146445 CCCACGCTTTCGTGCATTAGCGTCAGTTGTAGCCCAGATGACCGCCTTCGCCACCGGTGT 146504
Query 61 TCCTCCGTATATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCAC 120
|||||| ||||||| | |||||||| |||||| |||||||| || || | |||
Sbjct 146505 TCCTCCTAATATCTAAGAATTTCACCTCTACACTAGGAATTCCATCATCCCCTACTACAC 146564
Query 121 TCAAGAAAAACAGTTTCAAATGCAGGCTATGGGTTGAGCCCATAGTTTTCACATCTGACT 180
|| ||| | ||||| || ||| |||| ||||| | |||||| || |||
Sbjct 146565 TCTAGATTAGTAGTTTTGAAAGCAATTCCGAGGTTAAGCCCCGGGCTTTCACTTCCAACT 146624
Query 181 TGCCTTCCCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACG 240
| | |||||||| | | |||||| |||| ||| |||| | |||||| ||| ||| ||
Sbjct 146625 TACTAAACCGCCTACGCACTCTTTACGCCCAGTAATTCCGAACAACGCTAGCCCCCTCCG 146684
Query 241 TATTACCGCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATTCCTCAGGTA 290
| |||||||||||||||||||| ||||||||| ||||| ||| || |||
Sbjct 146685 TCTTACCGCGGCTGCTGGCACGGAGTTAGCCGGGGCTTTTTCTGCAAGTA 146734
>seq218279
Length=1762
Score = 111 bits (122), Expect = 3e-22
Identities = 102/129 (79%), Gaps = 0/129 (0%)
Strand=Plus/Minus
Query 153 GTTGAGCCCATAGTTTTCACATCTGACTTGCCTTCCCGCCTACACGCCCTTTACACCCAA 212
||||||| | | ||||||||||||||| |||||| | | |||||||| ||||
Sbjct 1748 GTTGAGCTCGGGGATTTCACATCTGACTTATAAGACCGCCTGCGCACCCTTTACGCCCAG 1689
Query 213 TAAATCCGGATAACGCTTGCCACCTACGTATTACCGCGGCTGCTGGCACGTAGTTAGCCG 272
||| |||| ||||||| || |||| |||||||||||||||||||||| ||||||||||
Sbjct 1688 TAATTCCGATTAACGCTCGCACCCTATGTATTACCGCGGCTGCTGGCACATAGTTAGCCG 1629
Query 273 TGGCTTATT 281
|||| ||
Sbjct 1628 GTGCTTCTT 1620
>seq337855
Length=263513
Score = 91.5 bits (100), Expect = 2e-16
Identities = 61/68 (90%), Gaps = 0/68 (0%)
Strand=Plus/Minus
Query 223 TAACGCTTGCCACCTACGTATTACCGCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATTC 282
||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 242648 TAACGCTCGCACCCTACGTATTACCGCGGCTGCTGGCACGTAGTTAGCCGGTGCTTATTC 242589
Query 283 CTCAGGTA 290
|| ||||
Sbjct 242588 TTCCGGTA 242581
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 825833348732
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |