Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ixodes_20scapularis_20[refseq_20GCF_5F000208615.1_202008-04-18] 369,492 sequences; 1,765,382,190 total letters Query= AAMG01001851.1 Length=140 Score E Sequences producing significant alignments: (Bits) Value seq165536 111 1e-22 >seq165536 Length=484117 Score = 111 bits (122), Expect = 1e-22 Identities = 108/138 (78%), Gaps = 1/138 (1%) Strand=Plus/Plus Query 1 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCATAGCCACCGGATCACTATGACCTG 60 |||||||||| ||||||||||||||||||||| || ||||||||||||||||||| Sbjct 12369 TACCTTTTATTCGTTGAGCGATGGCCCTTCCACTCGGGACCACCGGATCACTATGACCGA 12428 Query 61 CTTTCGCATCTGCTCTAGTTGTTGCTCTCGCAATCAAGCACACTTTTGCCATTGCACTAT 120 |||||| ||||||| |||| |||||| ||| || ||| |||||||||||| | Sbjct 12429 CTTTCGTCTCTGCTCGTCTTGTCAGACTCGCAGTCAGGCTAGCTTATGCCATTGCACTCT 12488 Query 121 -CACTACGATTTCCGACC 137 | ||||||||||| Sbjct 12489 AAAAGTTGATTTCCGACC 12506 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 350780676400