Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ixodes_20scapularis_20[refseq_20GCF_5F000208615.1_202008-04-18] 369,492 sequences; 1,765,382,190 total letters Query= AAMG01001946.1 Length=179 Score E Sequences producing significant alignments: (Bits) Value seq165536 129 6e-28 >seq165536 Length=484117 Score = 129 bits (142), Expect = 6e-28 Identities = 125/159 (79%), Gaps = 5/159 (3%) Strand=Plus/Plus Query 24 GTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTGCTTTCGCACCTG 83 |||||||||||||||||||| || | |||||||||||||||||||| |||||| ||| Sbjct 12381 GTTGAGCGATGGCCCTTCCACTCGGGACCACCGGATCACTATGACCGACTTTCGTCTCTG 12440 Query 84 CTCGAGCCGTCACTCTCGCAGTCAAGCCAGCTTATGCCATTGCACT---AACCTCACGAT 140 |||| |||| |||||||||| || |||||||||||||||||| || | ||| Sbjct 12441 CTCGTCTTGTCAGACTCGCAGTCAGGCTAGCTTATGCCATTGCACTCTAAAAGT--TGAT 12498 Query 141 GTCCGACCGTGATTAGCTGACCTTCGTGCTCCTCCGTTA 179 ||||||| | |||| ||| ||| || ||||||||| Sbjct 12499 TTCCGACCAACCTGAGCTAACCATCGCGCGCCTCCGTTA 12537 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 471904770704