Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ixodes_20scapularis_20[refseq_20GCF_5F000208615.1_202008-04-18] 369,492 sequences; 1,765,382,190 total letters Query= AAMG01002002.1 Length=198 Score E Sequences producing significant alignments: (Bits) Value seq160220 73.4 4e-11 >seq160220 Length=1149 Score = 73.4 bits (80), Expect = 4e-11 Identities = 105/146 (72%), Gaps = 3/146 (2%) Strand=Plus/Minus Query 1 TGCTGACCAACATCGCCCGCCTGATGGACAAGGAAGGCAAGGTGTTG-ACCGGCTTCGAC 59 |||||||||||| || | || ||||||||| ||| | ||||| || || | Sbjct 689 TGCTGACCAACACTCCCGGTGTGCTGGACAAGGCAGGTCAACTGTTGCGTCGCCTGTCAG 630 Query 60 CACGCAACAAGTGGACGACCTGATCGCCGACGGCACCATCTACGGCGGCATGCTGCCGAA 119 | | | || | ||||| ||| |||| || |||||||||| |||||| |||||||| || Sbjct 629 CTCAGACCA--TCGACGAACTGTTCGCTGATGGCACCATCTCCGGCGGTATGCTGCCCAA 572 Query 120 GATCCGTTGCGCACTGGAAGCAGTGC 145 |||| || || ||||| |||| || Sbjct 571 GATCTCTTCGGCCCTGGATGCAGCGC 546 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 532487139916