Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ixodes_20scapularis_20[refseq_20GCF_5F000208615.1_202008-04-18] 369,492 sequences; 1,765,382,190 total letters Query= AAMG01002055.1 Length=294 Score E Sequences producing significant alignments: (Bits) Value seq324894 73.4 7e-11 >seq324894 Length=394762 Score = 73.4 bits (80), Expect = 7e-11 Identities = 60/73 (82%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 140 TCATGCGTTTTTTACCGGCCTTTTGCTTCTCAAGCAGCTTGCGCTTACGGCTTACGTCAC 199 |||| | |||||||| || |||||||||||||| | || || |||||||||| |||| Sbjct 284003 TCATTCTCTTTTTACCTGCTTTTTGCTTCTCAAGTAATTTACGTTTACGGCTTATATCAC 283944 Query 200 CGCCGTAGCATTT 212 ||||||| ||||| Sbjct 283943 CGCCGTAACATTT 283931 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 838587531724