Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ixodes_20scapularis_20[refseq_20GCF_5F000208615.1_202008-04-18]
369,492 sequences; 1,765,382,190 total letters
Query= AAMG01002194.1
Length=319
Score E
Sequences producing significant alignments: (Bits) Value
seq165536 201 2e-49
seq16016 129 1e-27
>seq165536
Length=484117
Score = 201 bits (222), Expect = 2e-49
Identities = 192/243 (79%), Gaps = 7/243 (3%)
Strand=Plus/Minus
Query 1 AGTGCACATGGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATA 60
|| ||| |||||||||||||||| | ||||||||||||||||| || |||||||
Sbjct 14667 AGAGCATTTGGTGGATGCCTTGGCACTAGAAGGCGATGAAGGACGTAATACGCTGCGATA 14608
Query 61 AGCTGCGGGGAGTGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCCGGC 120
|||| |||||||| || || | ||||||||||| ||||||||||||||||||| || |
Sbjct 14607 AGCTTCGGGGAGTT-GCGAATAAACTTTGATCCGAAGATTTCCGAATGGGGAAAACCCAC 14549
Query 121 CCT-----TTGGGTCATTGCATGCTGAATACATAGGTATGCAAAGCGAACGCGGCGAACT 175
| || ||| |||| || ||||||||||| ||| | || ||| | |||||||
Sbjct 14548 CTAATTTATTAGGT-ATTGTATAGTGAATACATAGCTATATGAGGCAAACCCAGCGAACT 14490
Query 176 GAAACATCTAAGTAGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGTGGCGAGC 235
|||| ||||||||||||| |||||| || ||||||||||| ||| ||||||| |||||
Sbjct 14489 GAAATATCTAAGTAGCTGGAGGAAAGGACATCAACCGAGACTCCGTTAGTAGTGACGAGC 14430
Query 236 GAA 238
|||
Sbjct 14429 GAA 14427
>seq16016
Length=1091
Score = 129 bits (142), Expect = 1e-27
Identities = 141/186 (76%), Gaps = 1/186 (1%)
Strand=Plus/Plus
Query 135 CATGCTGAATACATAGGTATGCAAAG-CGAACGCGGCGAACTGAAACATCTAAGTAGCTG 193
||||||||||||||||| ||| || ||||| | |||||||| ||||| |||| ||
Sbjct 21 CATGCTGAATACATAGGCATGTGGAGGCGAACCGAGTGAACTGAACCATCTCAGTAACTC 80
Query 194 CAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGTGGCGAGCGAAATGGGATGAGCCTTT 253
||||||||||||||||||||||||| |||||||||||||||||| ||| |||||
Sbjct 81 GAGGAAAAGAAATCAACCGAGATTCCGGAAGTAGTGGCGAGCGAAACCGGACCAGCCTGG 140
Query 254 ACGAGATAGTTGAATTGATAGTGGAATCCTCTGGAAATAGGAGCCATAGCGGGTGATAGC 313
| | ||| | | ||||| |||| |||||| |||| ||| |||||||||
Sbjct 141 ATGTTTTAGCGTAGTGAATAGTCGAATGGAATGGAAAGTCCAGCCGTAGTAGGTGATAGC 200
Query 314 CCCGTA 319
|| |||
Sbjct 201 CCTGTA 206
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 915006585472
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |