Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ixodes_20scapularis_20[refseq_20GCF_5F000208615.1_202008-04-18]
369,492 sequences; 1,765,382,190 total letters
Query= NC_033731.1
Length=12548
Score E
Sequences producing significant alignments: (Bits) Value
seq283927 105 5e-19
>seq283927
Length=152763
Score = 105 bits (116), Expect = 5e-19
Identities = 169/240 (70%), Gaps = 11/240 (5%)
Strand=Plus/Minus
Query 6371 ACAATGGCAGACGACTTGAATGATGTCATAAGTAAAATGTTGTCTAG----TACATCAGG 6426
|| |||||||||||||||| || ||| || ||| ||||| ||| | || | ||
Sbjct 1519 ACCATGGCAGACGACTTGATGGAAGTCGCAA---AAAAGTTGT-TAGACAATTCACCGGG 1464
Query 6427 ACAAGGGTTGGATGACTACTCAGTAGTATCTATTTCTAACCACTTAGATTACGAGAAATG 6486
||||||| ||| || ||| | | | | ||| | ||||| | |||||||| |||||
Sbjct 1463 ACAAGGGCAGGACGATTACCAATTGATTACCATTGCCAACCATATCGATTACGAAAAATG 1404
Query 6487 GAACAATCACCAAAGGAAGGAATCAAATGATCCTGTATTCAGAGTGATGGGTCAATTTTT 6546
||| ||||||||||| || | || | || || ||||| |||||||| ||||| ||
Sbjct 1403 GAATAATCACCAAAG---AGATGCTAACAACCCGGTGTTCAGCGTGATGGGGCAATTCTT 1347
Query 6547 GGGAAAGCCTAACTTATTCACTAGGACACATGAGTTTTTCGAGAAATCGTTGATTTATTA 6606
|||| ||| ||||| || ||| | || || | || || || || || ||||||||
Sbjct 1346 GGGACTGCCAAACTTGTTAACTCGCACCCACAAATTCTTTGAAAACAGTTTAATTTATTA 1287
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 39871968979456
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |