Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ladona_20fulva_20[genbank_20GCA_5F000376725.1_202013-04-23] 10,166 sequences; 1,158,111,285 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq5093 172 8e-41 seq203 167 4e-39 seq6193 145 1e-32 >seq5093 Length=776812 Score = 172 bits (190), Expect = 8e-41 Identities = 167/209 (80%), Gaps = 7/209 (3%) Strand=Plus/Minus Query 18 GTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTCCTCGTTGAAGACCAACA 77 ||| ||||||||||||| ||||||||| |||||| |||||| ||||||| | | || | Sbjct 20906 GTAATCAACGCGAGCTT-ATGACTCGCACTTACTGGGAATT-CCTCGTTCATGGGAAAAA 20849 Query 78 ATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGA-TTACCCGGACCTGTCGGCC 136 ||||||| | ||||| | ||||| | | |||| | |||||||| ||| |||||| Sbjct 20848 ATTGCAAGCCCCAATCCCTAGCACGAAGGAGGTTCAGCGGGTTACCCGGGCCTTTCGGCC 20789 Query 137 AAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGG 196 | || |||| || ||| | | ||||| |||||| ||||||||||||||||||||||| Sbjct 20788 AGGGA---AGACACGCTGATTCCTTCAGTTTAGCGCACGTGCGGCCCAGAACATCTAAGG 20732 Query 197 GCATCACAGACCTGTTATTGCCTCAAACT 225 |||||||||||||||||||| ||||| || Sbjct 20731 GCATCACAGACCTGTTATTG-CTCAATCT 20704 Score = 104 bits (114), Expect = 4e-20 Identities = 62/64 (97%), Gaps = 1/64 (2%) Strand=Plus/Minus Query 162 CAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCA 221 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 9906 CAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTG-CTCA 9848 Query 222 AACT 225 | || Sbjct 9847 ATCT 9844 >seq203 Length=374090 Score = 167 bits (184), Expect = 4e-39 Identities = 175/223 (78%), Gaps = 8/223 (4%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| ||||||||||| | |||||||||||||||| ||| ||| Sbjct 314614 GTACAAAGGGCAGGGACGTAATCAACGCGAGCGT-ATGACTCGCGCTTACT-GGAGATTC 314557 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGA-TT 119 || ||| | | || |||||||| | || ||||||| | || |||| | || Sbjct 314556 CTAGTTCATGGGGAAAAATTGCAAGCCCCAATATA-ATCACGAAGGAAGTTCAGCGGGTT 314498 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 |||||| ||| ||| ||| | |||| || ||| | | ||||||||||||| ||||| Sbjct 314497 ACCCGGGCCTTTCGACCAGA---AAAGACACGCTGATTCCTTCAGTGTAGCGCGAGTGCG 314441 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAA 222 || ||||| |||||||||||||||| ||||||||||| ||||| Sbjct 314440 GCTCAGAAAATCTAAGGGCATCACATACCTGTTATTG-CTCAA 314399 >seq6193 Length=594026 Score = 145 bits (160), Expect = 1e-32 Identities = 168/218 (77%), Gaps = 9/218 (4%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||| ||| || |||||||||| |||||||||||||||| |||||| | Sbjct 127963 GTACAAAGGGCAGGGATGTAATCCACGCGAGCTT-ATGACTCGCGCTTACTGGGAATT-C 128020 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGA-TT 119 |||||| | | || || | | | ||| | ||||| | | ||||| | || Sbjct 128021 CTCGTTCATGGGAAAACATCGTAGCCC-CAATCT--AGCACGAAGGAGGTTCAACGGGTT 128077 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 || || ||| ||||| | | || ||| || ||| | | ||||||||||||||| ||| Sbjct 128078 ACATGGGCCTTTCGGCAA--GAGA-AGATACGCTGATTCCTTCAGTGTAGCGCGCGGGCG 128134 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGC 217 |||| ||||||||||||||||| ||||||||||||||| Sbjct 128135 GCCCGGAACATCTAAGGGCATCGCAGACCTGTTATTGC 128172 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751925940690