Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ladona_20fulva_20[genbank_20GCA_5F000376725.1_202013-04-23] 10,166 sequences; 1,158,111,285 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq5093 123 5e-26 seq9746 102 1e-19 >seq5093 Length=776812 Score = 123 bits (136), Expect = 5e-26 Identities = 197/281 (70%), Gaps = 30/281 (11%) Strand=Plus/Plus Query 44 CTTCACTGGGTGTGCCGGGGAGCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAG 103 ||||| || ||| || | ||| | || ||||||||||| ||||||| || |||||| Sbjct 28820 CTTCATTGAGTGCCTTGGTGGGCCGGCACGTTTACTTTGAACAAATTAG--TGCTCAAAG 28877 Query 104 CAGGCCTTTGCTCG----AATACATTA-GCATGGAATAATAGAATAGGACGTGCGGTTCT 158 |||||| ||| ||| ||||| | |||||||||||||||||||||| | |||||| Sbjct 28878 CAGGCCGTTGGTCGCCTGAATACTGTGTGCATGGAATAATAGAATAGGACCT-CGGTTCC 28936 Query 159 ATTTTGTTGGTTTCTAGGAC-CGCCGTAATGATTAATAGGGATAGTCGGGGGTGTCAGTA 217 ||||||||||||| || || || ||||| ||||| | Sbjct 28937 ATTTTGTTGGTTTTCAGAACTCGAGGTAAT--------------------GGTGTTATGG 28976 Query 218 TTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGCGTTC 277 || || ||||||||||||||||||| ||||| ||| ||||||||| || Sbjct 28977 TTGCGACGTTAGAGGTGAAATTCTTGGATCGTCGCAAGACGAACCGATGCGAAAGCATTT 29036 Query 278 ACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTTAGGGG 318 ||||| | |||||| || |||| ||||||||||||| || Sbjct 29037 GCCAAGAACGTTTTCGTTGATCA-AGAACGAAAGTTAGAGG 29076 >seq9746 Length=293397 Score = 102 bits (112), Expect = 1e-19 Identities = 104/133 (78%), Gaps = 6/133 (5%) Strand=Plus/Minus Query 44 CTTCACTGGGTGTGCCGGGGAGCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAG 103 ||||| || ||| || | ||| | || ||||||||||| ||||||||||| |||||| Sbjct 24833 CTTCATTGAGTGCCTTGGTGGGCCGGCACGTTTACTTTGAACAAATTAGAGTGCTCAAAG 24774 Query 104 CAGGCCTTTGCTC----GAATAC-ATTAGCATGGAATAATAGAATAGGACGTGCGGTTCT 158 ||||| ||| || |||||| | |||||||||||| |||||| || | |||||| Sbjct 24773 GAGGCCGTTGGTCGCCTGAATACTGTGTGCATGGAATAATGGAATAGTACCT-CGGTTCC 24715 Query 159 ATTTTGTTGGTTT 171 ||||||||||||| Sbjct 24714 ATTTTGTTGGTTT 24702 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915106960768