Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ladona_20fulva_20[genbank_20GCA_5F000376725.1_202013-04-23] 10,166 sequences; 1,158,111,285 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq9746 342 9e-92 seq5093 295 1e-77 seq565 268 2e-69 seq892 244 2e-62 seq4960 91.5 3e-16 >seq9746 Length=293397 Score = 342 bits (378), Expect = 9e-92 Identities = 245/281 (87%), Gaps = 1/281 (0%) Strand=Plus/Plus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGT-CATCAGTAGGGTAAAACTAACCTGTCTC 59 |||| ||| | ||||| || | |||| | |||||||||||||||||||||||||||| Sbjct 31421 TACTGAGCAGGATTACTATCGCAACGACTTTTCATCAGTAGGGTAAAACTAACCTGTCTC 31480 Query 60 ATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCG 119 | ||||||||||||||||||||||||||||||| |||||||||||||||||||||| || Sbjct 31481 ACGACGGTCTAAACCCAGCTCACGTTCCCTATTGGTGGGTGAACAATCCAACGCTTGGCG 31540 Query 120 AATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 179 |||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 31541 AATTCTGCTTCGCAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCGACGTCGCTA 31600 Query 180 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCC 239 |||||||||||| ||||||||||||||||||||||||||||| ||||| ||||||| || Sbjct 31601 TGAACGCTTGGCCGCCACAAGCCAGTTATCCCTGTGGTAACTATTCTGACACCTCTTGCT 31660 Query 240 TCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTC 280 ||| | | | | |||||||||||||||| ||||| Sbjct 31661 GGAAACTCCCCAAGCCAAAAGGATCGATAGGCCGTGCTTTC 31701 >seq5093 Length=776812 Score = 295 bits (326), Expect = 1e-77 Identities = 230/273 (84%), Gaps = 1/273 (0%) Strand=Plus/Minus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGT-CATCAGTAGGGTAAAACTAACCTGTCTC 59 |||| ||| | ||||| || | |||| | |||||||||| ||||| ||||||||||| Sbjct 41784 TACTGAGCAGGATTACTATCGCAACGACTTTTCATCAGTAGGTTAAAATTAACCTGTCTC 41725 Query 60 ATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCG 119 | ||||||||||||||||||||| || |||| | |||||||||||||||||||||| || Sbjct 41724 ACGACGGTCTAAACCCAGCTCACATTACCTAATGGTGGGTGAACAATCCAACGCTTGGCG 41665 Query 120 AATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 179 |||||||||||| |||||||||| |||||| |||| ||||||||||||| ||||||||| Sbjct 41664 AATTCTGCTTCGCAATGATAGGAACAGCCGAGATCGGAGGATCAAAAAGCGACGTCGCTA 41605 Query 180 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCC 239 |||||||| ||| ||||||||| ||||||||||||||||||| ||||| ||||||| || Sbjct 41604 TGAACGCTCGGCCGCCACAAGCAAGTTATCCCTGTGGTAACTATTCTGACACCTCTTGCT 41545 Query 240 TCAAATTTCGAGGGACTAAAGGATCGATAGGCC 272 ||| | | | | |||||||||||||||| Sbjct 41544 GGAAACTCCCCAAGCCAAAAGGATCGATAGGCC 41512 >seq565 Length=125987 Score = 268 bits (296), Expect = 2e-69 Identities = 184/208 (88%), Gaps = 0/208 (0%) Strand=Plus/Minus Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90 |||||||||||||||||||||||| ||||| || |||||||||||||||||||||||||| Sbjct 78556 TCATCAGTAGGGTAAAACTAACCTATCTCACGATGGTCTAAACCCAGCTCACGTTCCCTA 78497 Query 91 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGA 150 || ||||||||| |||||||||||| |||||||||||||| | ||||||||| || Sbjct 78496 TTGGTGGGTGAATAATCCAACGCTTGGCGAATTCTGCTTCGCAGCGGAAGGAAGAGCTGA 78437 Query 151 CATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCC 210 ||||||||||||||||| | ||| | ||||| |||||||||||||||||||||||||| Sbjct 78436 TATCGAAGGATCAAAAAGTGATGTCACCATGAATGCTTGGCTGCCACAAGCCAGTTATCC 78377 Query 211 CTGTGGTAACTTTTCTGGCACCTCTAGC 238 ||||||||||| ||||| ||||||| || Sbjct 78376 CTGTGGTAACTATTCTGACACCTCTTGC 78349 >seq892 Length=90013 Score = 244 bits (270), Expect = 2e-62 Identities = 171/195 (88%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 78 CTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGA 137 ||||||||||||||| |||||||||||||||||||||| |||||||||||||| |||| Sbjct 35639 CTCACGTTCCCTATTGGTGGGTGAACAATCCAACGCTTGGCGAATTCTGCTTCGCAATGA 35580 Query 138 TAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCAC 197 |||||||||| |||||||| |||||||| || ||||||||||||||||||||| ||||| Sbjct 35579 TAGGAAGAGCAGACATCGAGGGATCAAATAGTGACGTCGCTATGAACGCTTGGCCGCCAC 35520 Query 198 AAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTA 257 |||||||||||||||||||||||| ||||| ||||||| || ||| ||| | | | Sbjct 35519 AAGCCAGTTATCCCTGTGGTAACTATTCTGACACCTCTTGCTGGAAACTTCCCAAGCCAA 35460 Query 258 AAGGATCGATAGGCC 272 ||||||||||||||| Sbjct 35459 AAGGATCGATAGGCC 35445 >seq4960 Length=751920 Score = 91.5 bits (100), Expect = 3e-16 Identities = 55/58 (95%), Gaps = 0/58 (0%) Strand=Plus/Minus Query 53 CTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAA 110 |||||||| |||||||||| |||||||||||||||||||| ||||||||||||||||| Sbjct 313211 CTGTCTCACGACGGTCTAATCCCAGCTCACGTTCCCTATTGGTGGGTGAACAATCCAA 313154 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 854313141696