Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ladona_20fulva_20[genbank_20GCA_5F000376725.1_202013-04-23] 10,166 sequences; 1,158,111,285 total letters Query= AAMG01001634.1 Length=217 Score E Sequences producing significant alignments: (Bits) Value seq5093 77.0 4e-12 seq9746 75.2 1e-11 >seq5093 Length=776812 Score = 77.0 bits (84), Expect = 4e-12 Identities = 84/106 (79%), Gaps = 8/106 (8%) Strand=Plus/Minus Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGC-TAATGTATTCGGGC 68 ||||||||||||| || || | |||||||||||||||||||||| | |||||| ||| Sbjct 28949 AAACCAACAAAAT-GGAACCGAGGTCCTATTCTATTATTCCATGCACACAGTATTCAGGC 28891 Query 69 G--TAA--GCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGT 110 | || ||||||||||| || ||||||| |||| ||||| || Sbjct 28890 GACCAACGGCCTGCTTTGAGCA--CTAATTTGTTCAAAGTAAACGT 28847 >seq9746 Length=293397 Score = 75.2 bits (82), Expect = 1e-11 Identities = 83/106 (78%), Gaps = 6/106 (6%) Strand=Plus/Plus Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAAT-GTATTCGGGC 68 ||||||||||||| || || | || |||||| |||||||||||| | |||||| ||| Sbjct 24702 AAACCAACAAAAT-GGAACCGAGGTACTATTCCATTATTCCATGCACACAGTATTCAGGC 24760 Query 69 GT--AA--GCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGT 110 | || |||| |||||| ||||||||||| |||| ||||| || Sbjct 24761 GACCAACGGCCTCCTTTGAGCACTCTAATTTGTTCAAAGTAAACGT 24806 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595141382844