Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ladona_20fulva_20[genbank_20GCA_5F000376725.1_202013-04-23] 10,166 sequences; 1,158,111,285 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq5093 174 3e-41 seq203 149 1e-33 seq6193 141 2e-31 >seq5093 Length=776812 Score = 174 bits (192), Expect = 3e-41 Identities = 165/207 (80%), Gaps = 4/207 (2%) Strand=Plus/Plus Query 106 AGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTAC 165 || ||||| ||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 20704 AGATTGAG-CAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGTGCGCTAA 20762 Query 166 ACTGACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACT 225 ||||| || || || || | || | |||||| |||| | |||||| | | || || Sbjct 20763 ACTGAAGGAATCAGCGTGT-CTTCCC--TGGCCGAAAGGCCCGGGTAACCCGCTGAACCT 20819 Query 226 CTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAG 285 | ||||||| ||||| | | |||||||| || | | | |||||||||| || |||||| Sbjct 20820 CCTTCGTGCTAGGGATTGGGGCTTGCAATTTTTTCCCATGAACGAGGAATTCCCAGTAAG 20879 Query 286 CGCGTGTCATCAGCACGCGTTGATTAC 312 ||| ||||| ||| |||||||||||| Sbjct 20880 TGCGAGTCATAAGCTCGCGTTGATTAC 20906 Score = 104 bits (114), Expect = 4e-20 Identities = 62/64 (97%), Gaps = 1/64 (2%) Strand=Plus/Plus Query 106 AGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTAC 165 || ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 9844 AGATTGAG-CAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTAC 9902 Query 166 ACTG 169 |||| Sbjct 9903 ACTG 9906 >seq203 Length=374090 Score = 149 bits (164), Expect = 1e-33 Identities = 168/220 (76%), Gaps = 5/220 (2%) Strand=Plus/Plus Query 109 TTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACT 168 ||||| ||||||||||| |||||||||||||||| ||||| ||||||| ||||||||||| Sbjct 314399 TTGAG-CAATAACAGGTATGTGATGCCCTTAGATTTTCTGAGCCGCACTCGCGCTACACT 314457 Query 169 GACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTG 228 || || || || || | | | ||| || |||| | |||||| | | || || Sbjct 314458 GAAGGAATCAGCGTGT-CTTTTC--TGGTCGAAAGGCCCGGGTAACCCGCTGAACTTCCT 314514 Query 229 TCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGC 288 ||||| | | | || |||||||| || | | | ||| |||||| | ||||||||| Sbjct 314515 TCGTGATTATATTGGGGC-TTGCAATTTTTCCCCATGAACTAGGAATCTCCAGTAAGCGC 314573 Query 289 GTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328 | ||||| || |||||||||||||||||||||||||||| Sbjct 314574 GAGTCATACGCTCGCGTTGATTACGTCCCTGCCCTTTGTA 314613 >seq6193 Length=594026 Score = 141 bits (156), Expect = 2e-31 Identities = 163/215 (76%), Gaps = 6/215 (3%) Strand=Plus/Minus Query 114 GCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAG 173 ||||||||||||||| ||||||||||||||||| ||||||| ||||||||||||||| | Sbjct 128172 GCAATAACAGGTCTGCGATGCCCTTAGATGTTCCGGGCCGCCCGCGCGCTACACTGAAGG 128113 Query 174 AGCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTG 233 | || || || || | | |||| |||| | |||| | | || ||| ||||| Sbjct 128112 AATCAGCG-TATCTTCTC--TTGCCGAAAGGCCCATGTAACCCGTTGAACCTCCTTCGTG 128056 Query 234 CTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTC 293 || ||| | | | | || || | | | |||||||||| || |||||||||| ||| Sbjct 128055 CT--AGATTG-GGGCTACGATGTTTTCCCATGAACGAGGAATTCCCAGTAAGCGCGAGTC 127999 Query 294 ATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328 || ||| ||||| |||||| ||||||||||||||| Sbjct 127998 ATAAGCTCGCGTGGATTACATCCCTGCCCTTTGTA 127964 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947103707648