Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ladona_20fulva_20[genbank_20GCA_5F000376725.1_202013-04-23] 10,166 sequences; 1,158,111,285 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq311 199 1e-48 seq5093 165 2e-38 seq745 145 2e-32 seq2948 129 2e-27 seq5982 109 2e-21 seq7281 89.7 2e-15 >seq311 Length=528157 Score = 199 bits (220), Expect = 1e-48 Identities = 152/180 (84%), Gaps = 5/180 (3%) Strand=Plus/Minus Query 44 ATTTATTGTCACTACCTCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCT 103 |||| | ||||||||||||||||| ||||| ||||||||||||||||||||||||||||| Sbjct 234988 ATTTTTCGTCACTACCTCCCCGTGCCGGGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCT 234929 Query 104 TGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTAC 163 ||||||||||||||||||||||||||||| ||| |||||| |||||| |||||| || || Sbjct 234928 TGGATGTGGTAGCCGTTTCTCAGGCTCCCACTCTGGAATCAAACCCTGATTCCCTGTCAC 234869 Query 164 CCGTTGATACCATGGTAGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGA 223 ||||| | |||||||||| | | || ||| |||||||| ||||| |||||| Sbjct 234868 CCGTTACAAGCATGGTAGGC-----GCAGAACAGCGACAGTTGATAAAGCAGACATTTGA 234814 >seq5093 Length=776812 Score = 165 bits (182), Expect = 2e-38 Identities = 120/138 (87%), Gaps = 1/138 (1%) Strand=Plus/Minus Query 1 GTACTCATTCCAATTACAAGACC-CAAAAGAGCCCTGTATCAGTATTTATTGTCACTACC 59 || |||||||| ||||| | || | | ||| || ||||| ||||| | ||||||||| Sbjct 28597 GTTCTCATTCCGATTACGGGGCCTCGGATGAGTCCCGTATCGTTATTTTTCGTCACTACC 28538 Query 60 TCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 119 |||| ||| ||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 28537 TCCCTGTGCCGGGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 28478 Query 120 TTCTCAGGCTCCCTCTCC 137 |||||||||||||||||| Sbjct 28477 TTCTCAGGCTCCCTCTCC 28460 >seq745 Length=229811 Score = 145 bits (160), Expect = 2e-32 Identities = 115/138 (83%), Gaps = 0/138 (0%) Strand=Plus/Plus Query 90 CCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCC 149 |||||| |||||||||||||||||||| |||| |||||||||||||| |||||| ||||| Sbjct 150814 CCTGCTACCTTCCTTGGATGTGGTAGCAGTTTTTCAGGCTCCCTCTCTGGAATCAAACCC 150873 Query 150 TAATTCCCCGTTACCCGTTGATACCATGGTAGGCCACTATCCTACCATCGAAAGTTGATA 209 | ||||||||| ||| || |||||| ||||| | ||||||||| | |||||||| Sbjct 150874 TGATTCCCCGTCACCTATTACAACCATGATAGGCACAGAACCTACCATCAACAGTTGATA 150933 Query 210 GGGCAGAAATTTGAATGA 227 |||||| ||||||| || Sbjct 150934 AGGCAGACATTTGAAAGA 150951 >seq2948 Length=2645380 Score = 129 bits (142), Expect = 2e-27 Identities = 76/79 (96%), Gaps = 0/79 (0%) Strand=Plus/Minus Query 59 CTCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCG 118 ||||| ||| ||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 2093947 CTCCCTGTGCCGGGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCG 2093888 Query 119 TTTCTCAGGCTCCCTCTCC 137 ||||||||||||||||||| Sbjct 2093887 TTTCTCAGGCTCCCTCTCC 2093869 >seq5982 Length=446576 Score = 109 bits (120), Expect = 2e-21 Identities = 91/109 (83%), Gaps = 2/109 (2%) Strand=Plus/Plus Query 396 AAATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATAC 455 |||| ||| |||||||||||||||||||||| || ||||| | || | |||| ||| Sbjct 354628 AAATGAACCATAACTGATTTAATGAGCCATTTGCGGTTTCGCCTTAATGCG-GCTT-TAC 354685 Query 456 TTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 | |||||||||||| |||||| |||| |||||||||| ||||||||||| Sbjct 354686 TGAGACATGCATGGTTTAATCCTTGACACAAGCATATAACTACTGGCAG 354734 >seq7281 Length=2334109 Score = 89.7 bits (98), Expect = 2e-15 Identities = 72/87 (83%), Gaps = 0/87 (0%) Strand=Plus/Plus Query 96 GCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTC 155 || ||||||| |||| ||||||||||||||| ||||| |||||||| |||||||| |||| Sbjct 2134638 GCATTCCTTGAATGTAGTAGCCGTTTCTCAGACTCCCCCTCCGGAAGCGAACCCTGATTC 2134697 Query 156 CCCGTTACCCGTTGATACCATGGTAGG 182 |||| ||| || ||||| ||||| Sbjct 2134698 TCCGTCACCAGTCACGACCATAGTAGG 2134724 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510246452736