Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ladona_20fulva_20[genbank_20GCA_5F000376725.1_202013-04-23] 10,166 sequences; 1,158,111,285 total letters Query= NC_007902.1 Length=52162 Score E Sequences producing significant alignments: (Bits) Value seq3501 136 1e-27 >seq3501 Length=12068 Score = 136 bits (150), Expect = 1e-27 Identities = 331/490 (68%), Gaps = 11/490 (2%) Strand=Plus/Minus Query 23605 ACGAATGTGCTTCTGCACCAGTTCCAGCAGCGCCACCCGGCGATGGGTCAGGATTTCGTC 23664 ||| | |||||| |||| ||||||||||| |||| ||||| || || ||| |||| Sbjct 754 ACGGACGTGCTTTTGCAGCAGTTCCAGCACGGCCATGCGGCGGTGTTGCATGATGTCGTT 695 Query 23665 ATCCGGTATTGCAGTGATATCGACCAGCGGAAATGCCTGATGATAAACCGTGGCCGCCAA 23724 || ||||| | |||| || ||||||||||| || | | |||| | ||||| Sbjct 694 GTCGGGTATGACGGTGACGTCAACCAGCGGAAAGGCGTCACCGTAAAGCTGTTTCGCCAG 635 Query 23725 TTCTGGCTCAGCAAAACAGT-CCAGACAGCGCGTGCTGTACGGATACGGCGACGTGGTGC 23783 | ||||| | || ||| |||| ||| | ||| ||||| || || | Sbjct 634 ATGCGGCTCGTCGAA-CAGCGCCAGCCAGTCAAGGGAGTAGGGATAAGGGCTGGTTTGCC 576 Query 23784 CGTGGTAAAACAGCAGCGGAATGACCACCGGTAGCTGATCGTTGCCCTGT-TCTAGATGC 23842 | ||||| |||| | ||| || |||| ||| | | |||| |||||| || ||||| Sbjct 575 CATGGTAGAACAATATCGGGATAACCAGCGGCAAGCGGTCGT-GCCCTGCCTCCAGATGG 517 Query 23843 CGCTGCATCGCGGCGACCGCATACCGTAGCAATCGAAACGCCATCAGCTTTTCCGGGCGG 23902 || ||||| || || | || |||| || || ||||| || ||||| | | Sbjct 516 CGTTGCATGGCCGCAATACTGTATTTGAGCAGGCGGAAGGCCATGGTTTTATCCGGACTG 457 Query 23903 CTCTGGTGCTCTATCAGACAGTAGACGTAACCATCATGGCCCGTCGTGGTCTTCATCGAG 23962 ||||||||||| |||| ||||| || || || ||| ||||||||| | ||| Sbjct 456 CTCTGGTGCTCAATCAACGCATAGACATACCCGTC---GCCGCGCGTGGTCTTGAGGGAG 400 Query 23963 TAGAGCATATCCGAGCA-CTGGCCCTTCAGGTCGTCTTCGATAAATGAGCCGGAAGCCAT 24021 ||||||| ||| ||| | ||||| | ||||||||| |||||||||||||| || | | Sbjct 399 TAGAGCACATCAGAGTAGCTGGCGCG-CAGGTCGTCCTCGATAAATGAGCCAGATTCGAG 341 Query 24022 CGCCAATGTGCCGAAATCGCAGCGCTTAC-GCAGGTGCGGCGGCAGATGGATTTCCAGAA 24080 || ||| ||| |||||| |||| | |||| | | |||||| || | | ||| | Sbjct 340 ACGCAGGGTGTCGAGGTCGCAG-GCTTTCAGCAGCGGTGACGGCAGGTGCAGCTGCAGGA 282 Query 24081 AGTCCCGAGC 24090 |||| || || Sbjct 281 AGTCACGCGC 272 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 166776664081808