Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ladona_20fulva_20[genbank_20GCA_5F000376725.1_202013-04-23] 10,166 sequences; 1,158,111,285 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq2348 93.3 3e-14 >seq2348 Length=1756034 Score = 93.3 bits (102), Expect = 3e-14 Identities = 150/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 66253 TTCGAAGGATTCACCCCATACTTCGGACAGACATGGACACTTGTGTGGACACATCAGCGA 66312 |||||| ||||||||| ||| ||| | ||||| | || |||||||||| Sbjct 612037 TTCGAATTCTTCACCCCAACAATCGAACAATCCTGGACTTTCATGGGGACACATCAAACT 611978 Query 66313 CCAATCACCATCCTGTTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAA 66372 ||| | |||| ||| ||||| ||| || | ||||| ||||| ||||||||||| Sbjct 611977 CCATACGCCATTACTTTCAACACGTTTCATGAACAAGTCAGGAATCCACAGGGCGTAGAA 611918 Query 66373 GAGATCGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCAAA 66432 |||||| || |||| ||||| | || ||| || || ||| | || ||||| Sbjct 611917 GAGATCACGGGCTCTCACTTCCTCTTTTCCTGTATTCTTCTTCAGGTCCAAAAATTCAAA 611858 Query 66433 GATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAA 66468 ||||| ||||||||||| || || || ||||| || Sbjct 611857 AATGTCAGCATGCCATGGCTCAAGATAAATGGCAAA 611822 Score = 86.0 bits (94), Expect = 5e-12 Identities = 92/122 (75%), Gaps = 0/122 (0%) Strand=Plus/Minus Query 67085 GCGATACGGGCGGCCAGGACACCATAATCGGGATGTAGAGTCATCATACTGGCGGCAGTT 67144 ||||| | |||||| || ||| |||||||||||||| ||| ||||| |||| || ||| Sbjct 610454 GCGATTCTGGCGGCAAGTACAGCATAATCGGGATGTTTAGTAGTCATAGTGGCAGCTGTT 610395 Query 67145 TCAGCGGCCAAGGTATCAAGTTCAGCGGTAGTCACACCAGGATACAGGCCAGCAACGACT 67204 || || || || ||||||| || |||| || || |||| || |||||| || ||| Sbjct 610394 TCTGCAGCTAAATTATCAAGCTCTACGGTGGTAACCCCAGAGTAAAGGCCACTAATTACT 610335 Query 67205 TT 67206 || Sbjct 610334 TT 610333 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397518742070240