Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lasioglossum_20albipes_20[genbank_20GCA_5F000346575.1_202013-10-08] 12,599 sequences; 336,521,443 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq4790 205 2e-50 seq4915 96.9 6e-18 seq9119 86.0 1e-14 >seq4790 Length=10904 Score = 205 bits (226), Expect = 2e-50 Identities = 221/286 (77%), Gaps = 10/286 (3%) Strand=Plus/Minus Query 40 TGCCCTTCACTGGGTGTGCCGGGGAGCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTC 99 ||| |||||||| |||| || | ||| | || ||||||||||| ||||||||||| || Sbjct 1746 TGCTCTTCACTGAGTGTCGAGGTGGGCCGGTACGTTTACTTTGAACAAATTAGAGTGCTC 1687 Query 100 AAAGCAGGC---CTTTGCTCGAATACATTA-GCATGGAATAATAGAATAGGACGTGCGGT 155 ||||||||| ||| || |||||| | |||||||||||| ||||||||| | |||| Sbjct 1686 AAAGCAGGCTATCTTCGCCTGAATACTGTGTGCATGGAATAATGGAATAGGACCT-CGGT 1628 Query 156 TCTATTTTGTTGGTTTCTAGGACCGCCG---TAATGATTAATAGGGATAGTCGGGGGTGT 212 |||||||||||||||| | ||| | ||| |||||||||||||||| || ||||| | Sbjct 1627 TCTATTTTGTTGGTTT-TCGGAACCCCGAGGTAATGATTAATAGGGACAGATGGGGGCAT 1569 Query 213 CAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAG 272 ||||| || ||||||||||||||||||| ||||| || ||||||| Sbjct 1568 TCGTATTGCGACGTTAGAGGTGAAATTCTTGGATCGTCGCAAGACGGACAGAAGCGAAAG 1509 Query 273 CGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTTAGGGG 318 | || |||| |||||||||||||||| ||||||||||||| || Sbjct 1508 CATTTGCCAAAAATGTTTTCATTAATCA-AGAACGAAAGTTAGAGG 1464 >seq4915 Length=592 Score = 96.9 bits (106), Expect = 6e-18 Identities = 105/136 (77%), Gaps = 5/136 (4%) Strand=Plus/Plus Query 40 TGCCCTTCACTGGGTGTGCCGGGGAGCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTC 99 ||| ||||||| |||| || | ||| | || |||||||| | |||||||||| || Sbjct 313 TGCTCTTCACTAAGTGTCGAGGTGGGCCGGTACGTTTACTTTACACGAATTAGAGTGCTC 372 Query 100 AAAGCAGGC---CTTTGCTCGAATAC-ATTAGCATGGAATAATAGAATAGGACGTGCGGT 155 ||||||||| ||| || |||||| | ||||||||||| ||||||||| | |||| Sbjct 373 AAAGCAGGCTATCTTCGCCTGAATACTGTGCCCATGGAATAATCGAATAGGACCT-CGGT 431 Query 156 TCTATTTTGTTGGTTT 171 | |||||||||||||| Sbjct 432 TGTATTTTGTTGGTTT 447 >seq9119 Length=960 Score = 86.0 bits (94), Expect = 1e-14 Identities = 96/125 (77%), Gaps = 5/125 (4%) Strand=Plus/Minus Query 44 CTTCACTGGGTGTGCCGGGGAGCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAG 103 ||||||| |||| || | ||| | || |||||||| || |||||||||| |||| | Sbjct 428 CTTCACTAAGTGTCGAGGTGGGCCGGTACGTTTACTTTAAACGAATTAGAGTGCTCAATG 369 Query 104 CAGGC---CTTTGCTCGAATACATTAGC-ATGGAATAATAGAATAGGACGTGCGGTTCTA 159 ||||| ||| || |||||| | | |||||||||| ||||||||| | |||||||| Sbjct 368 CAGGCTATCTTCGCCTGAATACTGTGCCCATGGAATAATGGAATAGGACCT-CGGTTCTA 310 Query 160 TTTTG 164 ||||| Sbjct 309 TTTTG 305 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915084693952