Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lasioglossum_20albipes_20[genbank_20GCA_5F000346575.1_202013-10-08] 12,599 sequences; 336,521,443 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq4790 205 1e-50 seq6985 176 7e-42 seq6924 84.2 3e-14 >seq4790 Length=10904 Score = 205 bits (226), Expect = 1e-50 Identities = 215/292 (74%), Gaps = 47/292 (16%) Strand=Plus/Plus Query 12 TCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTG 71 ||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct 929 TCCTTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGCCATCACAGACCTGTTATTG 988 Query 72 CCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCC-------------- 117 | |||| || | |||| |||||| |||||||||||||| Sbjct 989 C-TCAATCT-CGTGCGGCTAGAAGCCGCCTGTCCCTCTAAGAAGATTTGTTTGTACGTTG 1046 Query 118 ---------AGCCACCAACCATAGTCGATGG----------------------GGCTATT 146 | ||||| || || || || | ||||| Sbjct 1047 GTAGTAAAAACCCACCGACAGAAGCCGGGGGCCTTCGAGATACCATAAGTTACGTCTATT 1106 Query 147 TAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAA 206 ||||||| || |||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 1107 TAGCAGGCTAGAGTCTCGTTCGTTATCGGAATTAACCAGACAAATCGCTCCACCAACTAA 1166 Query 207 GAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 ||||||||||||||||||||||| ||||||||||||||||| ||||||||| Sbjct 1167 GAACGGCCATGCACCACCACCCACCGAATCAAGAAAGAGCTACCAATCTGTC 1218 >seq6985 Length=1073 Score = 176 bits (194), Expect = 7e-42 Identities = 109/117 (93%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 142 CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCA 201 |||||||||||| || || ||||||||||||||||||||||||||||||| |||||||| Sbjct 259 CTATTTAGCAGGCTAGAGTTTCGTTCGTTATCGGAATTAACCAGACAAATCGCTCCACCA 200 Query 202 ACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 |||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| Sbjct 199 ACTAAGAACGGCCATGCACCACCATCCACCGAATCAAGAAAGAGCTATCAATCTGTC 143 >seq6924 Length=2357 Score = 84.2 bits (92), Expect = 3e-14 Identities = 46/46 (100%), Gaps = 0/46 (0%) Strand=Plus/Minus Query 19 GTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCT 64 |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 46 GTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCT 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796702748319