Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lasioglossum_20albipes_20[genbank_20GCA_5F000346575.1_202013-10-08] 12,599 sequences; 336,521,443 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq6372 334 1e-89 seq4052 331 2e-88 seq4087 325 7e-87 seq8842 253 3e-65 seq7067 237 3e-60 seq7269 77.0 6e-12 >seq6372 Length=5110 Score = 334 bits (370), Expect = 1e-89 Identities = 246/283 (87%), Gaps = 5/283 (2%) Strand=Plus/Minus Query 1 TACTAAGCGGAATTACCATTGGGGCGACG-GTCATCAGTAGGGTAAAACTAACCTGTCTC 59 |||| ||| | ||||| || | |||| |||||||||||||||||||||||||||||| Sbjct 2685 TACTGAGCAGGATTACTATCGCAACGACTAGTCATCAGTAGGGTAAAACTAACCTGTCTC 2626 Query 60 ATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCG 119 | |||||||||||||||||||||||||||| || | ||||||||||||| |||||| || Sbjct 2625 ACGACGGTCTAAACCCAGCTCACGTTCCCTGTTGGCGGGTGAACAATCCGACGCTTGGCG 2566 Query 120 AATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 179 |||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 2565 AATTCTGCTTCGCAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCGACGTCGCTA 2506 Query 180 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCC 239 |||||||||||| ||||||||||||||||||||||||||||||||||| ||||||| || Sbjct 2505 TGAACGCTTGGCCGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCTTGCT 2446 Query 240 TCAAA--TTTCGAGGGACTAAAGGATCGATAGGCCACACTTTC 280 ||| ||| | | | |||||||||||||||| ||||| Sbjct 2445 GAAAACTCTTCAA--GCCAAAAGGATCGATAGGCCGTGCTTTC 2405 >seq4052 Length=16363 Score = 331 bits (366), Expect = 2e-88 Identities = 245/283 (87%), Gaps = 5/283 (2%) Strand=Plus/Minus Query 1 TACTAAGCGGAATTACCATTGGGGCGACG-GTCATCAGTAGGGTAAAACTAACCTGTCTC 59 |||| ||| | ||||| || | |||| |||||||||||||||||||||||||||||| Sbjct 10658 TACTGAGCAGGATTACTATCGCAACGACTAGTCATCAGTAGGGTAAAACTAACCTGTCTC 10599 Query 60 ATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCG 119 | ||||||||||||||||||||| |||||| || | ||||||||||||| |||||| || Sbjct 10598 ACGACGGTCTAAACCCAGCTCACATTCCCTGTTGGCGGGTGAACAATCCGACGCTTGGCG 10539 Query 120 AATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 179 |||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 10538 AATTCTGCTTCGCAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCGACGTCGCTA 10479 Query 180 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCC 239 |||||||||||| ||||||||||||||||||||||||||||||||||| ||||||| || Sbjct 10478 TGAACGCTTGGCCGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCTTGCT 10419 Query 240 TCAAA--TTTCGAGGGACTAAAGGATCGATAGGCCACACTTTC 280 ||| ||| | | | |||||||||||||||| ||||| Sbjct 10418 GAAAACTCTTCAA--GCCAAAAGGATCGATAGGCCGTGCTTTC 10378 >seq4087 Length=8604 Score = 325 bits (360), Expect = 7e-87 Identities = 244/283 (86%), Gaps = 5/283 (2%) Strand=Plus/Plus Query 1 TACTAAGCGGAATTACCATTGGGGCGACG-GTCATCAGTAGGGTAAAACTAACCTGTCTC 59 |||| ||| | ||||| || | |||| |||||||||||||||||||||||||||||| Sbjct 6133 TACTGAGCAGGATTACTATCGCAACGACTAGTCATCAGTAGGGTAAAACTAACCTGTCTC 6192 Query 60 ATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCG 119 | ||||||||||||||||||||| |||||| || | ||||||||||||| |||||| || Sbjct 6193 ACGACGGTCTAAACCCAGCTCACATTCCCTGTTGGCGGGTGAACAATCCGACGCTTGGCG 6252 Query 120 AATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 179 |||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 6253 AATTCTGCTTCGCAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCGACGTCGCTA 6312 Query 180 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCC 239 |||||||||||| ||||||||||||||||||||||||||||||||||| ||||||| || Sbjct 6313 TGAACGCTTGGCCGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCTTGCT 6372 Query 240 TCAAA--TTTCGAGGGACTAAAGGATCGATAGGCCACACTTTC 280 ||| ||| | | | | |||||||||||||| ||||| Sbjct 6373 GAAAACTCTTCAA--GCCAACAGGATCGATAGGCCGTGCTTTC 6413 >seq8842 Length=17526 Score = 253 bits (280), Expect = 3e-65 Identities = 175/197 (89%), Gaps = 1/197 (1%) Strand=Plus/Minus Query 1 TACTAAGCGGAATTACCATTGGGGCGACG-GTCATCAGTAGGGTAAAACTAACCTGTCTC 59 |||| ||| | ||||| || | |||| |||||||||||||||||||||||||||||| Sbjct 2268 TACTGAGCAGGATTACTATCGCAACGACTAGTCATCAGTAGGGTAAAACTAACCTGTCTC 2209 Query 60 ATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCG 119 | ||||||||||||||||||||| |||||| || | ||||||||||||| |||||| || Sbjct 2208 ACGACGGTCTAAACCCAGCTCACATTCCCTGTTGGCGGGTGAACAATCCGACGCTTGGCG 2149 Query 120 AATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 179 |||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 2148 AATTCTGCTTCGCAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCGACGTCGCTA 2089 Query 180 TGAACGCTTGGCTGCCA 196 |||||||||||| |||| Sbjct 2088 TGAACGCTTGGCCGCCA 2072 Score = 253 bits (280), Expect = 3e-65 Identities = 175/197 (89%), Gaps = 1/197 (1%) Strand=Plus/Minus Query 1 TACTAAGCGGAATTACCATTGGGGCGACG-GTCATCAGTAGGGTAAAACTAACCTGTCTC 59 |||| ||| | ||||| || | |||| |||||||||||||||||||||||||||||| Sbjct 10208 TACTGAGCAGGATTACTATCGCAACGACTAGTCATCAGTAGGGTAAAACTAACCTGTCTC 10149 Query 60 ATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCG 119 | ||||||||||||||||||||| |||||| || | ||||||||||||| |||||| || Sbjct 10148 ACGACGGTCTAAACCCAGCTCACATTCCCTGTTGGCGGGTGAACAATCCGACGCTTGGCG 10089 Query 120 AATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 179 |||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 10088 AATTCTGCTTCGCAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCGACGTCGCTA 10029 Query 180 TGAACGCTTGGCTGCCA 196 |||||||||||| |||| Sbjct 10028 TGAACGCTTGGCCGCCA 10012 >seq7067 Length=27758 Score = 237 bits (262), Expect = 3e-60 Identities = 173/199 (87%), Gaps = 4/199 (2%) Strand=Plus/Plus Query 84 TTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAA 143 |||||| || | ||||||||||||| |||||| |||||||||||||| |||||||||| Sbjct 11748 TTCCCTGTTGGCGGGTGAACAATCCGACGCTTGGCGAATTCTGCTTCGCAATGATAGGAA 11807 Query 144 GAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCA 203 |||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| Sbjct 11808 GAGCCGACATCGAAGGATCAAAAAGCGACGTCGCTATGAACGCTTGGCCGCCACAAGCCA 11867 Query 204 GTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAA--TTTCGAGGGACTAAAGG 261 |||||||||||||||||||||||| ||||||| || ||| ||| | | | ||||| Sbjct 11868 GTTATCCCTGTGGTAACTTTTCTGACACCTCTTGCTGAAAACTCTTCAA--GCCAAAAGG 11925 Query 262 ATCGATAGGCCACACTTTC 280 ||||||||||| ||||| Sbjct 11926 ATCGATAGGCCGTGCTTTC 11944 >seq7269 Length=634 Score = 77.0 bits (84), Expect = 6e-12 Identities = 69/87 (79%), Gaps = 0/87 (0%) Strand=Plus/Plus Query 186 CTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAAT 245 |||||| |||||||||||||||||||||| |||||||||||| |||| | || ||| Sbjct 1 CTTGGCCGCCACAAGCCAGTTATCCCTGTAGTAACTTTTCTGACACCGGTTGCTGAAAAC 60 Query 246 TTCGAGGGACTAAAGGATCGATAGGCC 272 | | | |||||||||||||||| Sbjct 61 TCTTCATGCCAAAAGGATCGATAGGCC 87 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 854292354144