Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lasioglossum_20albipes_20[genbank_20GCA_5F000346575.1_202013-10-08] 12,599 sequences; 336,521,443 total letters Query= AAMG01001884.1 Length=191 Score E Sequences producing significant alignments: (Bits) Value seq4790 125 7e-27 seq4915 82.4 8e-14 seq9119 78.8 1e-12 >seq4790 Length=10904 Score = 125 bits (138), Expect = 7e-27 Identities = 141/183 (77%), Gaps = 8/183 (4%) Strand=Plus/Minus Query 10 ACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGC---CTTTGCTCGAATAC-ATTA 65 || ||||||||||| ||||||||| | ||||||||||| ||| || |||||| | Sbjct 1715 ACGTTTACTTTGAACAAATTAGAGTGCTCAAAGCAGGCTATCTTCGCCTGAATACTGTGT 1656 Query 66 CCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCC--CG 123 ||||||||||| ||||||||| | |||||||||||||| ||||| | ||| | || | Sbjct 1655 GCATGGAATAATGGAATAGGACCT-CGGTTCTATTTTGTTGGTTT-TCGGAACCCCGAGG 1598 Query 124 TAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTG 183 ||||||| |||| ||| || ||||| | ||||| || | |||||||||||||| Sbjct 1597 TAATGATTAATAGGGACAGATGGGGGCATTCGTATTGCGACGTTAGAGGTGAAATTCTTG 1538 Query 184 GAT 186 ||| Sbjct 1537 GAT 1535 >seq4915 Length=592 Score = 82.4 bits (90), Expect = 8e-14 Identities = 83/105 (79%), Gaps = 5/105 (5%) Strand=Plus/Plus Query 10 ACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGC---CTTTGCTCGAATAC-ATTA 65 || |||||||| | |||||||| | ||||||||||| ||| || |||||| | Sbjct 344 ACGTTTACTTTACACGAATTAGAGTGCTCAAAGCAGGCTATCTTCGCCTGAATACTGTGC 403 Query 66 CCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTT 110 |||||||||||| ||||||||| | ||||| |||||||| ||||| Sbjct 404 CCATGGAATAATCGAATAGGACCT-CGGTTGTATTTTGTTGGTTT 447 >seq9119 Length=960 Score = 78.8 bits (86), Expect = 1e-12 Identities = 78/98 (80%), Gaps = 5/98 (5%) Strand=Plus/Minus Query 10 ACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGC---CTTTGCTCGAATACATTAC 66 || |||||||| || |||||||| | |||| |||||| ||| || |||||| | | Sbjct 401 ACGTTTACTTTAAACGAATTAGAGTGCTCAATGCAGGCTATCTTCGCCTGAATACTGTGC 342 Query 67 C-ATGGAATAATAGAATAGGACGTGCGGTTCTATTTTG 103 | |||||||||| ||||||||| | ||||||||||||| Sbjct 341 CCATGGAATAATGGAATAGGACCT-CGGTTCTATTTTG 305 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511937508960