Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lasioglossum_20albipes_20[genbank_20GCA_5F000346575.1_202013-10-08] 12,599 sequences; 336,521,443 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq4790 232 1e-58 seq6924 187 5e-45 >seq4790 Length=10904 Score = 232 bits (256), Expect = 1e-58 Identities = 209/258 (81%), Gaps = 6/258 (2%) Strand=Plus/Minus Query 72 CTTCTTAGAGGGACTATCGGCT-CAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130 |||||||||||||| ||||| | ||||| || | ||||| |||||||||||||||| Sbjct 1030 CTTCTTAGAGGGACAGGCGGCTTCTAGCCGCACGA-GATTGAG-CAATAACAGGTCTGTG 973 Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190 ||| |||||||||||||||||||||||||||||||||||| || || || ||| Sbjct 972 ATGGCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGAAGGAATCAGCGTGTTTT--- 916 Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTG 250 || |||||| |||| | |||||| | | || ||| ||||||| ||||| | | ||| Sbjct 915 CCCTGGCCGAAAGGCCCGGGTAACCCGTTGAACCTCCTTCGTGCTAGGGATTGGGGCTTG 856 Query 251 CAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATT 310 |||||||| | | | |||||||||| || |||||||||| ||||| ||| |||||||||| Sbjct 855 CAATTATTCCCCATGAACGAGGAATTCCCAGTAAGCGCGAGTCATAAGCTCGCGTTGATT 796 Query 311 ACGTCCCTGCCCTTTGTA 328 |||||||||||||||||| Sbjct 795 ACGTCCCTGCCCTTTGTA 778 >seq6924 Length=2357 Score = 187 bits (206), Expect = 5e-45 Identities = 166/207 (80%), Gaps = 3/207 (1%) Strand=Plus/Plus Query 122 AGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACG 181 |||||||||||||||||||||||||||||||||||||||||||||| | || || || Sbjct 1 AGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACGAAAGGAATCAGCG 60 Query 182 AGTTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGAT 241 || || |||||| |||| | |||||| | | || ||| ||||||| ||||| Sbjct 61 TATTTT---CCCTGGCCGAAAGGCCCGGGTAACCCGTTGAACCTCCTTCGTGCTAGGGAT 117 Query 242 AGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCAC 301 | ||||||||||| | | | |||||||||| || |||||||||| ||||| ||| | Sbjct 118 TCGGGCTTGCAATTATTCCCCATGAACGAGGAATTCCCAGTAAGCGCGAGTCATAAGCTC 177 Query 302 GCGTTGATTACGTCCCTGCCCTTTGTA 328 ||||||||||||||||||||||||||| Sbjct 178 GCGTTGATTACGTCCCTGCCCTTTGTA 204 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947080662272