Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lasioglossum_20albipes_20[genbank_20GCA_5F000346575.1_202013-10-08] 12,599 sequences; 336,521,443 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq4970 113 4e-20 >seq4970 Length=98340 Score = 113 bits (124), Expect = 4e-20 Identities = 136/185 (74%), Gaps = 0/185 (0%) Strand=Plus/Minus Query 61192 CATTTCATTAAACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAAT 61251 |||||||| || ||||| || ||||| || ||||| || || || ||||| |||||| Sbjct 66232 CATTTCATATCTCACGTGTTAGCATTCTTCGCTGCTTCTGATGGAATTGTCAACGAGAAT 66173 Query 61252 TTATTGGAACGTTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTC 61311 | | ||| | ||| || ||||| ||||| | ||||| || || || || || ||| Sbjct 66172 CTTGTAGAAAGGTTCAGTCAAGAGGTCCAAGTTACAGAGGCACGCTGCTTTTATGGTTTC 66113 Query 61312 CAGATTGCCATGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATC 61371 ||| |||| ||||| ||||||||||| || ||||| | | | |||||||| || ||| Sbjct 66112 CAGGTTGCTATGGAAAATGTCCACTCAGAAATGTATTCTTTGTTGATCGATACATATATC 66053 Query 61372 AGGGA 61376 | ||| Sbjct 66052 AAGGA 66048 Score = 91.5 bits (100), Expect = 1e-13 Identities = 124/170 (73%), Gaps = 10/170 (6%) Strand=Plus/Minus Query 61434 GAAAGCGGATTGGGCCTTCAATTGGAT----CACCAGTACAACGGCTACATTTGGTGAAC 61489 |||||| | ||||| || |||||||| ||| ||| | || || || |||| Sbjct 65927 GAAAGCTAACTGGGCATTGAATTGGATAAACCACGAGT----CTGCCACTTTCCCCGAAC 65872 Query 61490 GATTGCTGGCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTT-GCCGCAATC 61548 || | | |||||||| | ||| || || |||||||||| || | |||| ||||| ||| Sbjct 65871 GAATAGTCGCATTTGCTGCGGTGGAAGGCATATTTTTCAGCGG-TAGTTTCGCCGCTATC 65813 Query 61549 TTTTGGTTGAAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGA 61598 ||||||||||||||| | || || ||||| || || || || ||||| || Sbjct 65812 TTTTGGTTGAAGAAAAGAGGTCTCATGCCTGGCCTTACATTTAGCAACGA 65763 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397506953309360