Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lasioglossum_20albipes_20[genbank_20GCA_5F000346575.1_202013-10-08] 12,599 sequences; 336,521,443 total letters Query= NC_025734.1 Length=2288 Score E Sequences producing significant alignments: (Bits) Value seq3407 138 2e-29 >seq3407 Length=1101 Score = 138 bits (152), Expect = 2e-29 Identities = 198/275 (72%), Gaps = 7/275 (3%) Strand=Plus/Plus Query 1961 TCCATCCTTGATTGCGTAATCATAACCTTTCTCTGGAGTGCCACGAGAAGGCACAACGTT 2020 ||||||||||||||||||||| ||||| || ||| | || || || || |||||||| Sbjct 577 TCCATCCTTGATTGCGTAATCGTAACCACGTTCCGGACTTCCTCGTGATGGTACAACGTT 636 Query 2021 CGGGTGCCGACCGTCCACATCGAAGATACGAGCTGAGCGGCTTCGAAACTTTCGGTTGAA 2080 |||||| | ||||| ||||| |||||| ||| ||||| | ||||| | ||| Sbjct 637 CGGGTGGTGGCCGTCAACATCAAAGATATCGGCTCGACGGCTCCTGAACTTCTTGCCGAA 696 Query 2081 GTCTGC--AAAGCAGTGAAGATGAATTCCCCCAGTGGTTGGATGAATCTCTCTGGCGACG 2138 || || |||||| || |||||| | || ||| | | |||| ||||| | | | Sbjct 697 ATC-GCAGAAAGCA-TGGAGATGAGTACCTCCA---GCAGAATGATCCTCTCGCCCAATG 751 Query 2139 ATGCACTCTGCTCCAAGTGCTGAAAGGTGGTTGCTAACGGACCACGGGTCCAGATCGCCG 2198 |||||||||| ||| |||| || || ||||| ||||||||| || || || ||| Sbjct 752 ATGCACTCTGATCCCAGTGTAGAGAGATGGTTTGAAACGGACCATTCATCAAGTTCACCG 811 Query 2199 CACTGGGCGTAAGTAAGAAGGACATATCGGGAGTT 2233 ||||| || || || || || ||||| || ||||| Sbjct 812 CACTGCGCATATGTGAGGAGTACATACCGAGAGTT 846 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7211834463036