Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lasioglossum_20albipes_20[genbank_20GCA_5F000346575.1_202013-10-08] 12,599 sequences; 336,521,443 total letters Query= NC_025735.1 Length=2187 Score E Sequences producing significant alignments: (Bits) Value seq3407 132 7e-28 >seq3407 Length=1101 Score = 132 bits (146), Expect = 7e-28 Identities = 183/253 (72%), Gaps = 6/253 (2%) Strand=Plus/Plus Query 1856 CGAGGCCTCCTGCAACAATATCTCCGTCCTTGCACGCGTAGAGTGCACCC---TTGCGAG 1912 |||| |||||||| ||||| | ||| |||||| ||||| | | | || || || Sbjct 555 CGAGACCTCCTGCGACAATGTTTCCATCCTTGATTGCGTA-ATCGTAACCACGTTCCG-- 611 Query 1913 GATTGCGTTTAGACCGTTCAATGTTCGGGTGGAAGCCTCCAACATCAAAGATGTCGGCTC 1972 || | | | || || ||| |||||||||| ||| ||||||||||||| ||||||| Sbjct 612 GACTTCCTCGTGATGGTACAACGTTCGGGTGGTGGCCGTCAACATCAAAGATATCGGCTC 671 Query 1973 GTCGGGATCGAAACTTTCGTCCAAAATCGCAGAAAACATGGAGATGAGTACCTCTAACAG 2032 | ||| | ||||| || |||||||||||| |||||||||||||||||| | ||| Sbjct 672 GACGGCTCCTGAACTTCTTGCCGAAATCGCAGAAAGCATGGAGATGAGTACCTCCAGCAG 731 Query 2033 CATGATTCTCTCTGGCCACGATACACTCCGCTCCAAGTGATCCGAAATGGTCATTAACGG 2092 ||||| ||||| | | ||| ||||| | ||| |||| || ||||| ||||| Sbjct 732 AATGATCCTCTCGCCCAATGATGCACTCTGATCCCAGTGTAGAGAGATGGTTTGAAACGG 791 Query 2093 CCCATTCATCGAG 2105 ||||||||| || Sbjct 792 ACCATTCATCAAG 804 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6888677728002