Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lasioglossum_20albipes_20[genbank_20GCA_5F000346575.1_202013-10-08] 12,599 sequences; 336,521,443 total letters Query= NC_025736.1 Length=2224 Score E Sequences producing significant alignments: (Bits) Value seq3407 205 1e-49 >seq3407 Length=1101 Score = 205 bits (226), Expect = 1e-49 Identities = 221/293 (75%), Gaps = 0/293 (0%) Strand=Plus/Plus Query 1884 GGCCGAGATAGCCCTCCAGCGACCACGTCTCCATCTTTGATCGCATAGTCATAACCGCCT 1943 ||||| | || ||||| ||||| | || |||||| ||||| || || || ||||| | | Sbjct 548 GGCCGTGCGAGACCTCCTGCGACAATGTTTCCATCCTTGATTGCGTAATCGTAACCACGT 607 Query 1944 TCCGGCCTTCCTCGAGATGCTTCAATGTTAGGGTGGAAGCCTCCAACATCAAACACATCG 2003 ||||| |||||||| |||| | ||| ||| |||||| ||| |||||||||| | |||| Sbjct 608 TCCGGACTTCCTCGTGATGGTACAACGTTCGGGTGGTGGCCGTCAACATCAAAGATATCG 667 Query 2004 GGTCTTCGGGATCGAAACTTTCGGGAGAAATCGCAGAAAGCATGGAGATGAGTACCCCCA 2063 | || ||| | ||||| | |||||||||||||||||||||||||||||| ||| Sbjct 668 GCTCGACGGCTCCTGAACTTCTTGCCGAAATCGCAGAAAGCATGGAGATGAGTACCTCCA 727 Query 2064 TCAGCGTGATGCTCTCGTCCAATGATACACTCACCGCCAAGGAATGCCAGATGGTCATTA 2123 ||| |||| |||||| |||||||| ||||| || || | ||||||| | Sbjct 728 GCAGAATGATCCTCTCGCCCAATGATGCACTCTGATCCCAGTGTAGAGAGATGGTTTGAA 787 Query 2124 ACGGCCCATGCATCAAGGTCGCCGCACTGTGCGTAGGTAAGGAGGACATAGCG 2176 |||| |||| ||||||| || |||||||| || || || ||||| ||||| || Sbjct 788 ACGGACCATTCATCAAGTTCACCGCACTGCGCATATGTGAGGAGTACATACCG 840 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7007061878460