Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lasioglossum_20albipes_20[genbank_20GCA_5F000346575.1_202013-10-08] 12,599 sequences; 336,521,443 total letters Query= NC_025737.1 Length=2199 Score E Sequences producing significant alignments: (Bits) Value seq3407 179 5e-42 >seq3407 Length=1101 Score = 179 bits (198), Expect = 5e-42 Identities = 213/289 (74%), Gaps = 0/289 (0%) Strand=Plus/Plus Query 1840 CGCTCGGCCGAGATAACCCTCCAGCGACCACGTCTCCATCTTTGATCGCATAGTCGTAAC 1899 |||| ||||| | | ||||| ||||| | || |||||| ||||| || || ||||||| Sbjct 543 CGCTTGGCCGTGCGAGACCTCCTGCGACAATGTTTCCATCCTTGATTGCGTAATCGTAAC 602 Query 1900 CGCCTTCCGGCTTTCCGTAAGATGGAACAAGGTTCGGGTGGCGGCCTCCAACATCAAAGA 1959 | | |||||| |||| ||||| |||| |||||||||| |||| |||||||||||| Sbjct 603 CACGTTCCGGACTTCCTCGTGATGGTACAACGTTCGGGTGGTGGCCGTCAACATCAAAGA 662 Query 1960 CATCGGATCGTCGGGATCGAAATCGGCGGGAGAAATCACAGAAAGCATGGAGATGAGTAC 2019 ||||| ||| ||| | || | |||||| |||||||||||||||||||||| Sbjct 663 TATCGGCTCGACGGCTCCTGAACTTCTTGCCGAAATCGCAGAAAGCATGGAGATGAGTAC 722 Query 2020 CTCCATCAGCGTGCAACTCTCGTCCAATGATACACTCAGCTCCAAGGAACGCCAAATGGT 2079 ||||| ||| || |||||| |||||||| ||||| | ||| || | | ||||| Sbjct 723 CTCCAGCAGAATGATCCTCTCGCCCAATGATGCACTCTGATCCCAGTGTAGAGAGATGGT 782 Query 2080 CATTAACGGTCCATGCATCAAGAGTGCCGCACTGTGCGTACGTGAGAAG 2128 ||||| |||| ||||||| |||||||| || || ||||| || Sbjct 783 TTGAAACGGACCATTCATCAAGTTCACCGCACTGCGCATATGTGAGGAG 831 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6927072587610