Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lasioglossum_20albipes_20[genbank_20GCA_5F000346575.1_202013-10-08] 12,599 sequences; 336,521,443 total letters Query= NC_025738.1 Length=2175 Score E Sequences producing significant alignments: (Bits) Value seq3407 199 5e-48 >seq3407 Length=1101 Score = 199 bits (220), Expect = 5e-48 Identities = 320/454 (70%), Gaps = 7/454 (2%) Strand=Plus/Plus Query 1725 GCCTTTGGATCCAGTCGTGCAACACATTCCCAAAACTCGCCCTCACTTTCTTGACTGACA 1784 ||||||||||||||| || ||||| ||||||||| |||||| || |||||| Sbjct 443 GCCTTTGGATCCAGTTGTTCAACAAGACTCCAAAACTCTGACTCACTCTCAGCGCTGACA 502 Query 1785 ATAATGCTCCACGAAGACACATCTTCGTAAACTCCTCTTCCGCTCGGCCGAGGTAACCCT 1844 || || ||| | ||| | | ||| | |||| ||||| | | ||| Sbjct 503 ATCTGGCCCCATTTATCGCCATTTGACACAGCTCGACACTCGCTTGGCCGTGCGAGACCT 562 Query 1845 CCTGCGCAGACATCTCCATCCTTTGTCGCATAATCCCAGCCACCCTCCGGCCTTCCGAAA 1904 |||||| | | ||||||||| | || ||||| | |||| ||||| ||||| Sbjct 563 CCTGCGACAATGTTTCCATCCTTGATTGCGTAATCGTAACCACGTTCCGGACTTCCTCGT 622 Query 1905 GATGGCATGACGTTCGGGTGGCGGCCTCCAACATCAAAGACATCGGATCGTCGGGATCGA 1964 ||||| | |||||||||||| |||| |||||||||||| ||||| ||| ||| | Sbjct 623 GATGGTACAACGTTCGGGTGGTGGCCGTCAACATCAAAGATATCGGCTCGACGGCTCCTG 682 Query 1965 AACTTTCGGGAGAAATCGCAGAAAGCATGGAGATGAGTACCGTCATCAGCGTGCAACTCT 2024 ||||| | |||||||||||||||||||||||||||||| || ||| || |||| Sbjct 683 AACTTCTTGCCGAAATCGCAGAAAGCATGGAGATGAGTACCTCCAGCAGAATGATCCTCT 742 Query 2025 CGTCCAATGATACACTCAGCTCCAAGGAATGACAGGTGGTCGTTAACGGCCCACGCATCA 2084 || |||||||| ||||| | ||| || || || |||| ||||| ||| ||||| Sbjct 743 CGCCCAATGATGCACTCTGATCCCAGTGTAGAGAGATGGTTTGAAACGGACCATTCATCA 802 Query 2085 AGATCGCCGCACTGTGCGTAGGTAAGGAGGACATAACGTGA-CTGA--ACAAA-GTAGGC 2140 || || |||||||| || || || ||||| ||||| || || ||| ||||| | |||| Sbjct 803 AGTTCACCGCACTGCGCATATGTGAGGAGTACATACCGAGAGTTGATGACAAATGCAGGC 862 Query 2141 AGGTTTGGGTGGCATCGAAGTGTGTCCTGGGAAA 2174 | || | ||| |||||||| ||||||| || Sbjct 863 A--TTAGCGTGTGTCCGAAGTGT-TCCTGGGCAA 893 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6850282868394