Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lasioglossum_20albipes_20[genbank_20GCA_5F000346575.1_202013-10-08] 12,599 sequences; 336,521,443 total letters Query= NC_026166.1 Length=2196 Score E Sequences producing significant alignments: (Bits) Value seq3407 158 2e-35 >seq3407 Length=1101 Score = 158 bits (174), Expect = 2e-35 Identities = 233/323 (72%), Gaps = 8/323 (2%) Strand=Plus/Plus Query 1877 CCATCCTTGATTGCATAGTCGTATCCCAACTCCGGAGTGCCTCGAGACGGCGTAACGTTT 1936 |||||||||||||| || ||||| || |||||| | ||||| || || |||||| Sbjct 578 CCATCCTTGATTGCGTAATCGTAACCACGTTCCGGACTTCCTCGTGATGGTACAACGTTC 637 Query 1937 GGGTGGTGACCGTCGACATCGAAAAGATCAGCTTTTCGACTTCGAAGCTTCCGTCCGAAA 1996 |||||||| ||||| ||||| || | ||| ||| || || | | |||| |||||| Sbjct 638 GGGTGGTGGCCGTCAACATCAAAGATATCGGCTCGACGGCTCCTGAACTTCTTGCCGAAA 697 Query 1997 TCGCAAAACACGTGGAGGTGAAGTCCTCCATCCTCATGATGCTCTCTTCCAACGATGCAT 2056 ||||| || | ||||| ||| |||||| | ||||| ||||| |||| |||||| Sbjct 698 TCGCAGAAAGCATGGAGATGAGTACCTCCAGCAGAATGATCCTCTCGCCCAATGATGCAC 757 Query 2057 TCGCCTCCCAGTG--ACGAAATGCGTTCCATAACGTCCCATCCACTGAGCTCTCCGCATT 2114 || |||||||| || ||| ||| | |||| |||| || || || ||||| | Sbjct 758 TCTGATCCCAGTGTAGAGAGATG-GTTTGA-AACGGACCATTCATCAAGTTCACCGCACT 815 Query 2115 GAGCATAAGTGAGTAAGACATAACGGCTGTTGAAGGCAAGTGTCGGCATTAGCGTGAGTG 2174 | ||||| ||||| | ||||| || ||||| | ||| || ||||||||||| ||| Sbjct 816 GCGCATATGTGAGGAGTACATACCGAGAGTTGATGACAAATGCAGGCATTAGCGT--GTG 873 Query 2175 TCCTCGAGTG-TCCTGGGCAAAC 2196 ||| |||| |||||||||||| Sbjct 874 TCC-GAAGTGTTCCTGGGCAAAC 895 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6917473872708