Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lasioglossum_20albipes_20[genbank_20GCA_5F000346575.1_202013-10-08] 12,599 sequences; 336,521,443 total letters Query= NC_026169.1 Length=2249 Score E Sequences producing significant alignments: (Bits) Value seq3407 93.3 6e-16 >seq3407 Length=1101 Score = 93.3 bits (102), Expect = 6e-16 Identities = 164/235 (70%), Gaps = 12/235 (5%) Strand=Plus/Plus Query 1901 CGAGTCCCCCAGCCACAACGTCTCCATCTTTGATTGCATAATCAAACCCTTCTTCTGGTG 1960 |||| || || || |||| || |||||| |||||||| ||||| | || ||| || Sbjct 555 CGAGACCTCCTGCGACAATGTTTCCATCCTTGATTGCGTAATCGTAACCACGTTCCGGAC 614 Query 1961 TTCCACGAGAAGGCGATACATTCGGGTGCTGTCCTTCAACATCGAATGCA-CGG---GA- 2015 |||| || || || || |||||||| || || |||||||| || | ||| || Sbjct 615 TTCCTCGTGATGGTACAACGTTCGGGTGGTGGCCGTCAACATCAAAGATATCGGCTCGAC 674 Query 2016 -GTTCCTGGACCGATATTTGACTCCGAAGTCGACAAAAGCGTGCAGATGAATACCCCCAT 2074 | ||||| || | ||| ||||| ||| ||||| || |||||| |||| ||| Sbjct 675 GGCTCCTGAAC---TTCTTG---CCGAAATCGCAGAAAGCATGGAGATGAGTACCTCCAG 728 Query 2075 CTGCGTGATCCTCTCGGCCGATGATGCATTCAGCTCCAAGTCCCGCAAGATGGTT 2129 | | ||||||||||| || |||||||| || | ||| ||| | |||||||| Sbjct 729 CAGAATGATCCTCTCGCCCAATGATGCACTCTGATCCCAGTGTAGAGAGATGGTT 783 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7087051169310