Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lasioglossum_20albipes_20[genbank_20GCA_5F000346575.1_202013-10-08] 12,599 sequences; 336,521,443 total letters Query= NC_026810.1 Length=2251 Score E Sequences producing significant alignments: (Bits) Value seq3407 120 4e-24 >seq3407 Length=1101 Score = 120 bits (132), Expect = 4e-24 Identities = 204/293 (70%), Gaps = 2/293 (1%) Strand=Plus/Plus Query 1919 AGCCCTCCCGCAACAACGTCTCCATCCTTGATCGCATAATCGTAGCCTTTCTCTGGCGTG 1978 || ||||| || |||| || |||||||||||| || |||||||| || || || | Sbjct 557 AGACCTCCTGCGACAATGTTTCCATCCTTGATTGCGTAATCGTAACCACGTTCCGGACTT 616 Query 1979 CCACGAGATGGCGATATGTTTGGGTGGAAACCTCCAACATCGAAGACACGTACGTTTCGG 2038 || || ||||| | ||| |||||| || ||||||| |||| | | ||| Sbjct 617 CCTCGTGATGGTACAACGTTCGGGTGGTGGCCGTCAACATCAAAGATATCGGCTCGACGG 676 Query 2039 CTTCGGAACTTTCGGTTGAAGTCG-ACAAAACAGTGCAAATGAGTTCCCCCATCATCGTG 2097 || | |||||| | ||| ||| | ||| || || | |||||| || ||| || || Sbjct 677 CTCCTGAACTTCTTGCCGAAATCGCAGAAAGCA-TGGAGATGAGTACCTCCAGCAGAATG 735 Query 2098 ATTCTCTCTTGCAATGATGCACTCTGCCCCAAGGGTACTAAGATGGTTTGAAACATCCCA 2157 || ||||| ||||||||||||||| || || ||| |||||||||||||| ||| Sbjct 736 ATCCTCTCGCCCAATGATGCACTCTGATCCCAGTGTAGAGAGATGGTTTGAAACGGACCA 795 Query 2158 TTCGTCGAGGCCATTGCTTTGAGCGTATGTGAGAAGTAGGTATCGGGAATTGA 2210 ||| || || || || || || |||||||| |||| || || || |||| Sbjct 796 TTCATCAAGTTCACCGCACTGCGCATATGTGAGGAGTACATACCGAGAGTTGA 848 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7093450312578