Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lasioglossum_20albipes_20[genbank_20GCA_5F000346575.1_202013-10-08] 12,599 sequences; 336,521,443 total letters Query= NC_026817.1 Length=2235 Score E Sequences producing significant alignments: (Bits) Value seq3407 89.7 7e-15 >seq3407 Length=1101 Score = 89.7 bits (98), Expect = 7e-15 Identities = 197/292 (67%), Gaps = 14/292 (5%) Strand=Plus/Minus Query 58 CGCTATGTCCTCATCACTTACGCTCAATGCGGAGAGCTGGACCCATGGGCTGTTCACGAC 117 || ||||| ||| |||| || || || ||||| || || || |||| | ||| || Sbjct 840 CGGTATGTACTCCTCACATATGCGCAGTGCGGTGAACTTGATGAATGGTCCGTTTCAAAC 781 Query 118 TCTATTACTTCATACCCAGCTGAGTGTCTCATTGGTCGAGAGAACCACGCTGATGGGGGC 177 | | || || | | ||||| ||||||| |||||| | || ||| ||| || Sbjct 780 CATCTCTCTACACTGGGATCAGAGTGCATCATTGGGCGAGAGGATCATTCTGCTGGAGGT 721 Query 178 ATTCATCTCCACGCTTTCGTGGATTTCGGTCGACGCATCAATCTCAGGGACCCGCGA--C 235 | ||||||||| |||||| |||||||| || || ||||| || ||| | Sbjct 720 ACTCATCTCCATGCTTTCTGCGATTTCGG------CAAGAAGTTCAGGAGCCGTCGAGCC 667 Query 236 G----CTTCGATGTTGACGACCGCCACCCGAACATTCAACCATGTGGTAGAACACCACAA 291 | ||| |||||||||| || |||||||||| || ||||| | ||| || || Sbjct 666 GATATCTTTGATGTTGACGGCCACCACCCGAACGTTGTACCATCACGAGGAAGTCCGGAA 607 Query 292 AAGATGCT-CGACTATGCGATCAAGGACGGAGACGTTGTCGCAGGAGGGCTC 342 | | | ||| || || |||||||| ||| || ||||||||||||| ||| Sbjct 606 C-GTGGTTACGATTACGCAATCAAGGATGGAAACATTGTCGCAGGAGGTCTC 556 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7042257166434