Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lasioglossum_20albipes_20[genbank_20GCA_5F000346575.1_202013-10-08] 12,599 sequences; 336,521,443 total letters Query= NC_027820.1 Length=2253 Score E Sequences producing significant alignments: (Bits) Value seq3407 208 1e-50 >seq3407 Length=1101 Score = 208 bits (230), Expect = 1e-50 Identities = 297/410 (72%), Gaps = 6/410 (1%) Strand=Plus/Plus Query 1793 GTGACAAGTGTTTTCGGATCCAACTCTCGAAGCAAGTCAA-AAAACTCTT-CTCGACTTT 1850 ||| |||||| || ||||||| | | || |||| | |||||||| ||| ||| | Sbjct 434 GTGGCAAGTGCCTTTGGATCCAGTTGTTCAA-CAAGACTCCAAAACTCTGACTC-ACTCT 491 Query 1851 CTGCGCTGACAATTGTGCGCCACTTATCCGCAAGTGAAGGAAGTCCACCTCCGCCCGGCC 1910 | ||||||||||| || ||| ||||| || ||| | || || ||| |||| Sbjct 492 CAGCGCTGACAATCTGGCCCCATTTATCGCCATTTGACACAGCTCGACACTCGCTTGGCC 551 Query 1911 TCGCCAACCCCCCTGCAACAACGTCTCCATCTTTGATCGCATAGTCGTAACCGCATTCCG 1970 || | || ||||| |||| || |||||| ||||| || || |||||||| | ||||| Sbjct 552 GTGCGAGACCTCCTGCGACAATGTTTCCATCCTTGATTGCGTAATCGTAACCACGTTCCG 611 Query 1971 GACGACCTCTAGATGGTGTAATGTTTGGGTGGTGGCCTCCGACATCaaaaaaaTCGGATC 2030 ||| |||| |||||| || ||| ||||||||||| | |||||||| | ||||| || Sbjct 612 GACTTCCTCGTGATGGTACAACGTTCGGGTGGTGGCCGTCAACATCAAAGATATCGGCTC 671 Query 2031 GTCGTGATTGTTTCTTTCTT-CCAAAATCGACGAAAACATGGAGATGAGTACCTCCATCA 2089 | || | | | ||||| || |||||| |||| |||||||||||||||||||| || Sbjct 672 GACG-GCTCCTGAACTTCTTGCCGAAATCGCAGAAAGCATGGAGATGAGTACCTCCAGCA 730 Query 2090 GCGTGATCCTCTCGTCCAATGATACACTCCGCCCCAAGGCTTGAGATATGGTCCAAAATG 2149 | ||||||||||| |||||||| ||||| | || || | |||| ||||| ||| | Sbjct 731 GAATGATCCTCTCGCCCAATGATGCACTCTGATCCCAGTGTAGAGAGATGGTTTGAAACG 790 Query 2150 TCCCATTCAGACAGGTCGCCAGACTGAGCGTAGGTGAGGAGGACATAGCG 2199 ||||||| || || || |||| || || |||||||| ||||| || Sbjct 791 GACCATTCATCAAGTTCACCGCACTGCGCATATGTGAGGAGTACATACCG 840 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7099849455846