Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lasioglossum_20albipes_20[genbank_20GCA_5F000346575.1_202013-10-08] 12,599 sequences; 336,521,443 total letters Query= NC_028460.1 Length=2221 Score E Sequences producing significant alignments: (Bits) Value seq3407 170 3e-39 >seq3407 Length=1101 Score = 170 bits (188), Expect = 3e-39 Identities = 190/251 (76%), Gaps = 2/251 (1%) Strand=Plus/Plus Query 1884 CGAGCCCTCCCGCAACGACGTCTCCATGTTTTGTTGCATAGTCGTAGCCGCCTGCCGGGT 1943 |||| ||||| || || | || ||||| || |||| || ||||| || | | |||| Sbjct 555 CGAGACCTCCTGCGACAATGTTTCCATCCTTGATTGCGTAATCGTAACCACGTTCCGGAC 614 Query 1944 TGCCTCGAGATGGCGCAATGTTCGGATGGAAGCCTCCAACATCAAAGATATCGGGTCGTC 2003 | ||||| ||||| ||| |||||| ||| ||| |||||||||||||||||| ||| | Sbjct 615 TTCCTCGTGATGGTACAACGTTCGGGTGGTGGCCGTCAACATCAAAGATATCGGCTCGAC 674 Query 2004 GGGATC-GAAATTTTCGCTCGAAAGCAACGAAAGCGTGGAGATGAGTACCTCGATCAGCA 2062 || | ||| || | || ||||| | |||||| |||||||||||||||| | ||| | Sbjct 675 GGCTCCTGAACTTCTTGC-CGAAATCGCAGAAAGCATGGAGATGAGTACCTCCAGCAGAA 733 Query 2063 TGATCCTCTCGGGCAATGATGCATTCTGCACCAAGTGACGAGAAATGGTCGTTAACGGCC 2122 ||||||||||| |||||||||| |||| || |||| |||| ||||| ||||| | Sbjct 734 TGATCCTCTCGCCCAATGATGCACTCTGATCCCAGTGTAGAGAGATGGTTTGAAACGGAC 793 Query 2123 CACTCATCAAG 2133 || |||||||| Sbjct 794 CATTCATCAAG 804 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6997463163558