Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lasioglossum_20albipes_20[genbank_20GCA_5F000346575.1_202013-10-08] 12,599 sequences; 336,521,443 total letters Query= NC_030141.1 Length=2247 Score E Sequences producing significant alignments: (Bits) Value seq3407 176 6e-41 >seq3407 Length=1101 Score = 176 bits (194), Expect = 6e-41 Identities = 243/338 (72%), Gaps = 4/338 (1%) Strand=Plus/Plus Query 1912 AGACCTCCTGCCACCACGTCGCCGTCTTTGATTGCGTAGTCGTAACCCTTCTCTGGAGTT 1971 ||||||||||| || | || || || ||||||||||| |||||||| || ||| || Sbjct 557 AGACCTCCTGCGACAATGTTTCCATCCTTGATTGCGTAATCGTAACCACGTTCCGGACTT 616 Query 1972 CCTCGAGACTGCGAAATGTTTGGGTGGTGACCATCAACATCGAAGATATCACTTCGCCGA 2031 ||||| || | || ||| |||||||| || |||||||| |||||||| ||| || Sbjct 617 CCTCGTGATGGTACAACGTTCGGGTGGTGGCCGTCAACATCAAAGATATCGGCTCGACGG 676 Query 2032 GTTCGAAATTTTCTGTTGAAATCGACGAAAGCATGGAGGTGAATTCCGCCATCCTCGTGA 2091 | | || || || ||||||| |||||||||||| ||| | || ||| | ||| Sbjct 677 CTCCTGAACTTCTTGCCGAAATCGCAGAAAGCATGGAGATGAGTACCTCCAGCAGAATGA 736 Query 2092 CGCTCTCGTCCAATGATGCATTCTGCTCCCAGTGTTGAAAGCAAGTCGTTAACCGCCCAA 2151 |||||| ||||||||||| |||| ||||||||| || || || ||| | ||| Sbjct 737 TCCTCTCGCCCAATGATGCACTCTGATCCCAGTGTAGAGAGATGGTTTGAAACGGACCAT 796 Query 2152 GGGTCGAGGTCTCCGCATTGAGCGTAAGTGAGGAGGACATAGCGACTGTTGACTTGGAAT 2211 || || || ||||| || || || |||||||| ||||| ||| ||||| ||| Sbjct 797 TCATCAAGTTCACCGCACTGCGCATATGTGAGGAGTACATACCGAGAGTTGATGACAAAT 856 Query 2212 GCTGACATGA---TGTGTCCAAAGTG-TCCTGGGCGAA 2245 || | ||| | ||||||| ||||| |||||||| || Sbjct 857 GCAGGCATTAGCGTGTGTCCGAAGTGTTCCTGGGCAAA 894 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7080652026042