Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lasioglossum_20albipes_20[genbank_20GCA_5F000346575.1_202013-10-08]
12,599 sequences; 336,521,443 total letters
Query= NC_030142.1
Length=2125
Score E
Sequences producing significant alignments: (Bits) Value
seq3407 129 8e-27
>seq3407
Length=1101
Score = 129 bits (142), Expect = 8e-27
Identities = 241/351 (69%), Gaps = 6/351 (2%)
Strand=Plus/Plus
Query 1780 TTGGTCTCGCAAGGCCTCCACAGATAACGTCTCCATCCTTGATCGCGTAGTCGTAACCCT 1839
|||| | || || ||||| || || || |||||||||||| ||||| ||||||||
Sbjct 546 TTGGCCGTGCGAGACCTCCTGCGACAATGTTTCCATCCTTGATTGCGTAATCGTAACCAC 605
Query 1840 TCTCTGGTGTGCCTCGAGAAGGTTCAATGTTTGGGTGGTAGCCGAGTACATCGAAAACAT 1899
|| || | ||||| || ||| ||| ||| ||||||| |||| ||||| || | ||
Sbjct 606 GTTCCGGACTTCCTCGTGATGGTACAACGTTCGGGTGGTGGCCGTCAACATCAAAGATAT 665
Query 1900 CAGTCTTTCGACTTCTAAACTTCCGTCCGAAATCGCAGAAGACGTGGAGATGAGTTCCTC 1959
| | || || || |||||| |||||||||||||| | ||||||||||| ||||
Sbjct 666 CGGCTCGACGGCTCCTGAACTTCTTGCCGAAATCGCAGAAAGCATGGAGATGAGTACCTC 725
Query 1960 CATCAGCGTGAGTTTCTCTTGCGACGATACACTCGCCTCCCAATTCCGAAATGCGGTCCA 2019
|| ||| ||| |||| | | ||| ||||| ||||| | || | |||
Sbjct 726 CAGCAGAATGATCCTCTCGCCCAATGATGCACTCTGATCCCAGTGTAGAGAGATGGTTTG 785
Query 2020 TAACGGCGAAACCGTCGAGGTCTCCGCACTGTGCGTAGGTGAGGAGGACATATTTGGCGT 2079
||||| | | || || || |||||||| || || |||||||| ||||| | ||
Sbjct 786 AAACGGACCATTCATCAAGTTCACCGCACTGCGCATATGTGAGGAGTACATACCGAGAGT 845
Query 2080 TAATGGCGAA---AGTCATGTGGTGTGTTCTCGAA--GGTCCTGGGCAAAC 2125
| ||| | || || ||| | | |||| |||| | ||||||||||||
Sbjct 846 TGATGACAAATGCAGGCAT-TAGCGTGTGTCCGAAGTGTTCCTGGGCAAAC 895
Score = 96.9 bits (106), Expect = 5e-17
Identities = 53/53 (100%), Gaps = 0/53 (0%)
Strand=Plus/Plus
Query 1 TAATATTATAGCCCAGGACACAGGGCACAGCCCGGGTATTTATACCTGTCCTC 53
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 896 TAATATTATAGCCCAGGACACAGGGCACAGCCCGGGTATTTATACCTGTCCTC 948
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 6690304286694
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |