Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lasioglossum_20albipes_20[genbank_20GCA_5F000346575.1_202013-10-08] 12,599 sequences; 336,521,443 total letters Query= NC_030144.1 Length=2384 Score E Sequences producing significant alignments: (Bits) Value seq3407 100 4e-18 >seq3407 Length=1101 Score = 100 bits (110), Expect = 4e-18 Identities = 209/311 (67%), Gaps = 3/311 (1%) Strand=Plus/Plus Query 2004 CAGGTCGACCTCCGCGCGGCCGCTCGAGCCCTCCCGCAACAACCTCGCCATCTTTGATTG 2063 ||| ||||| ||| ||||| |||| ||||| || |||| | ||||| ||||||| Sbjct 531 CAGCTCGACACTCGCTTGGCCGTGCGAGACCTCCTGCGACAATGTTTCCATCCTTGATTG 590 Query 2064 CGTAATCATAGCCCTTCTCTGGTGTTCCCTTAGAAGGGACAACGTTGGGATGCCTACCCT 2123 ||||||| || || || || |||| || || |||||||| || || || | Sbjct 591 CGTAATCGTAACCACGTTCCGGACTTCCTCGTGATGGTACAACGTTCGGGTGGTGGCCGT 650 Query 2124 CCACATCGAAAATATCCACGCGTCGAGAACGGAACTTCCGGCCGAAGTCAACAAACACGT 2183 | ||||| || ||||| | || || | ||||||| |||||| || || | | Sbjct 651 CAACATCAAAGATATCGGCTCGACGGCTCCTGAACTTCTTGCCGAAATCGCAGAAAGCAT 710 Query 2184 GAAGATGAACTCCTCCAGTTGTTGGGTGTAACTCTCTTGCGACGATGCACTCAGCACCGA 2243 | |||||| |||||| | | || ||||| | | ||||||||| | || | Sbjct 711 GGAGATGAGTACCTCCA---GCAGAATGATCCTCTCGCCCAATGATGCACTCTGATCCCA 767 Query 2244 GTGATGACAAATGATCGCTGACAGCCCATTCGTCAAGGTCTCCGCATTGTGCATATGTGA 2303 ||| || | ||| | || | |||||| ||||| || ||||| || |||||||||| Sbjct 768 GTGTAGAGAGATGGTTTGAAACGGACCATTCATCAAGTTCACCGCACTGCGCATATGTGA 827 Query 2304 GAAGCACATAC 2314 | || |||||| Sbjct 828 GGAGTACATAC 838 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7518993339900