Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lasioglossum_20albipes_20[genbank_20GCA_5F000346575.1_202013-10-08] 12,599 sequences; 336,521,443 total letters Query= NC_030145.1 Length=2308 Score E Sequences producing significant alignments: (Bits) Value seq3407 140 5e-30 >seq3407 Length=1101 Score = 140 bits (154), Expect = 5e-30 Identities = 203/284 (71%), Gaps = 2/284 (1%) Strand=Plus/Plus Query 1978 CCCCCTGCAACAACGTTTCCGTCTTTTGTCGCATAGTCCCAACCGCCCTCTGGACGACCT 2037 || ||||| |||| |||||| || || | || || || |||| | || |||| ||| Sbjct 560 CCTCCTGCGACAATGTTTCCATCCTTGATTGCGTAATCGTAACCACGTTCCGGACTTCCT 619 Query 2038 TTAGATGGCACAACGTTCGGGTGCTTGCCTCCGACATCAAAGTAGTCTCCTCGTCGGGAC 2097 ||||| |||||||||||||| | ||| | ||||||||| || |||| ||| | Sbjct 620 CGTGATGGTACAACGTTCGGGTGGTGGCCGTCAACATCAAAGATATCGGCTCGACGGCTC 679 Query 2098 -TGCTTTTTTCTGCCGAAATCAGCGAAAACGTGGAGATGAGTACCTCCATCAGCGTGATC 2156 || || | |||||||||| |||| | |||||||||||||||||| ||| ||||| Sbjct 680 CTGAACTTCT-TGCCGAAATCGCAGAAAGCATGGAGATGAGTACCTCCAGCAGAATGATC 738 Query 2157 TTCTCGTCCGATGATACACTCCGCTCCAAGGCCTGAAATATGGTCCAGAACGGCCCACTC 2216 ||||| || ||||| ||||| | ||| || || | ||||| ||||| ||| || Sbjct 739 CTCTCGCCCAATGATGCACTCTGATCCCAGTGTAGAGAGATGGTTTGAAACGGACCATTC 798 Query 2217 AGAAAGCTCTCCAGATTGAGGGTAAGTGAGGAGGACATAACGAG 2260 | ||| || || | || | || |||||||| ||||| |||| Sbjct 799 ATCAAGTTCACCGCACTGCGCATATGTGAGGAGTACATACCGAG 842 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7275825895716