Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lasioglossum_20albipes_20[genbank_20GCA_5F000346575.1_202013-10-08] 12,599 sequences; 336,521,443 total letters Query= NC_030146.1 Length=2164 Score E Sequences producing significant alignments: (Bits) Value seq3407 118 1e-23 >seq3407 Length=1101 Score = 118 bits (130), Expect = 1e-23 Identities = 181/254 (71%), Gaps = 8/254 (3%) Strand=Plus/Plus Query 1854 CCATCCTTGATCGCATAGTCGTAGCCTC--TCCATGGAGTTCCATAAGATGGCGCGATGT 1911 ||||||||||| || || ||||| || | ||| ||| |||| ||||| | | || Sbjct 578 CCATCCTTGATTGCGTAATCGTAACCACGTTCC--GGACTTCCTCGTGATGGTACAACGT 635 Query 1912 TTGGGTGACGACCGTCGACATCAAAGATATCAGTCCTTCGGCTTCGGAACTTCCGTCCGA 1971 | ||||| | ||||| |||||||||||||| | | ||||| | ||||||| |||| Sbjct 636 TCGGGTGGTGGCCGTCAACATCAAAGATATCGGCTCGACGGCTCCTGAACTTCTTGCCGA 695 Query 1972 AATCGATGAAGCAATGGAGATGAATACCCCCATCCGCGTGTACTTCTCGGCCGACGATGC 2031 ||||| ||| |||||||||| |||| ||| | | || | ||||| || | ||||| Sbjct 696 AATCGCAGAAAGCATGGAGATGAGTACCTCCAGCAGAATGATCCTCTCGCCCAATGATGC 755 Query 2032 ACTCAGCTCCCAGTCCAGAAAAGTGGTCCATAACCCGGA--ATCCATCGAGGGCATTGCA 2089 |||| | ||||||| ||| | |||| | | |||| || |||| || || ||| Sbjct 756 ACTCTGATCCCAGTGTAGAGAGATGGT--TTGAAACGGACCATTCATCAAGTTCACCGCA 813 Query 2090 CTGAGCGTATGTGA 2103 ||| || ||||||| Sbjct 814 CTGCGCATATGTGA 827 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6815087580420