Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lasioglossum_20albipes_20[genbank_20GCA_5F000346575.1_202013-10-08] 12,599 sequences; 336,521,443 total letters Query= NC_030147.1 Length=2226 Score E Sequences producing significant alignments: (Bits) Value seq3407 77.0 5e-11 >seq3407 Length=1101 Score = 77.0 bits (84), Expect = 5e-11 Identities = 194/293 (66%), Gaps = 14/293 (5%) Strand=Plus/Plus Query 1849 CGAGTCCGCCAGCCACAACGTCTCCGTCCTTGACCGCATAGTCG-AGCATCTTTTGAGGT 1907 |||| || || || |||| || ||| ||||||| || || ||| | | | || || Sbjct 555 CGAGACCTCCTGCGACAATGTTTCCATCCTTGATTGCGTAATCGTAACCACGTTCC-GGA 613 Query 1908 GTTCTTCCGCATGGCGTAATGTTCGGGTGCTGGCCGTTAACATCAAAGA------GTCGA 1961 ||| || |||| || ||||||||| ||||||| ||||||||||| |||| Sbjct 614 CTTCCTCGTGATGGTACAACGTTCGGGTGGTGGCCGTCAACATCAAAGATATCGGCTCGA 673 Query 1962 CTGTCTCTGATGTCAGTCTTCTTTCCAAGATCCACGAAAGCGTGGAGGTGAATGCCTCCA 2021 | | |||| |||||| || | ||| |||||| ||||| ||| | |||||| Sbjct 674 CGGCTCCTGA------ACTTCTTGCCGAAATCGCAGAAAGCATGGAGATGAGTACCTCCA 727 Query 2022 TCCACGTGATTTTCTCGTCCAATGAGACACTCAGCGTGAAGTGATGCAAGATGGTCGCAG 2081 | |||| ||||| ||||||| ||||| | |||| | ||||||| | Sbjct 728 GCAGAATGATCCTCTCGCCCAATGATGCACTCTGATCCCAGTGTAGAGAGATGGTTTGAA 787 Query 2082 ACCATCCAGGGATCCAGGTCGCCGCATTGGGAGTATGTGAGAAGGACATAGCG 2134 || ||| ||| || || ||||| || | |||||||| || ||||| || Sbjct 788 ACGGACCATTCATCAAGTTCACCGCACTGCGCATATGTGAGGAGTACATACCG 840 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7013461021728