Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lasioglossum_20albipes_20[genbank_20GCA_5F000346575.1_202013-10-08] 12,599 sequences; 336,521,443 total letters Query= NC_030447.1 Length=2264 Score E Sequences producing significant alignments: (Bits) Value seq3407 87.8 3e-14 >seq3407 Length=1101 Score = 87.8 bits (96), Expect = 3e-14 Identities = 206/311 (66%), Gaps = 0/311 (0%) Strand=Plus/Plus Query 1829 CCAAAACTCTGACTCATTCTTTGCATTGATGATTTCAACCCACACCCCACCATTTGCATC 1888 |||||||||||||||| ||| || ||| || | |||| | ||||||| | Sbjct 472 CCAAAACTCTGACTCACTCTCAGCGCTGACAATCTGGCCCCATTTATCGCCATTTGACAC 531 Query 1889 CACTCTGCCTCCAGTAGGTCGTTCGAGTCCCCCAGCAACAACGTCTCCATCTTTGATTGC 1948 ||| | | | || ||| |||| || || || |||| || |||||| |||||||| Sbjct 532 AGCTCGACACTCGCTTGGCCGTGCGAGACCTCCTGCGACAATGTTTCCATCCTTGATTGC 591 Query 1949 ATAATCAAACCCGTCTTCTGGTGTACCACGTGACGGCGATACATTCGGGTGGCATCCTTC 2008 ||||| | || ||| || | || ||||| || || ||||||||| || || Sbjct 592 GTAATCGTAACCACGTTCCGGACTTCCTCGTGATGGTACAACGTTCGGGTGGTGGCCGTC 651 Query 2009 AACATCGAATGCACGGGCGTTCCTGGTCCGATATTTGACTCCGAAGTCGACAAAAGCGTG 2068 |||||| || | ||| | | ||| | || ||||| ||| ||||| || Sbjct 652 AACATCAAAGATATCGGCTCGACGGCTCCTGAACTTCTTGCCGAAATCGCAGAAAGCATG 711 Query 2069 CAAATGAATACCCCCATCTGCGTGATCCTCTCGGCCGATGATGCATTCAGCTCCAAGTCC 2128 | |||| |||| ||| | | ||||||||||| || |||||||| || | ||| ||| Sbjct 712 GAGATGAGTACCTCCAGCAGAATGATCCTCTCGCCCAATGATGCACTCTGATCCCAGTGT 771 Query 2129 CGCAAGATGGT 2139 | ||||||| Sbjct 772 AGAGAGATGGT 782 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7135044743820