Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lasioglossum_20albipes_20[genbank_20GCA_5F000346575.1_202013-10-08] 12,599 sequences; 336,521,443 total letters Query= NC_033743.1 Length=2182 Score E Sequences producing significant alignments: (Bits) Value seq3407 212 9e-52 >seq3407 Length=1101 Score = 212 bits (234), Expect = 9e-52 Identities = 303/417 (73%), Gaps = 16/417 (4%) Strand=Plus/Plus Query 1725 GTGACAAGCGTCTTCGGATCCAACTGTCGAAGCAAGTCAA-AAAACTC-GTCTCGACTTT 1782 ||| |||| | ||| ||||||| ||| || |||| | ||||||| | ||| ||| | Sbjct 434 GTGGCAAGTGCCTTTGGATCCAGTTGTTCAA-CAAGACTCCAAAACTCTGACTC-ACTCT 491 Query 1783 CTGCCGCGACAATTTCGCTCCACTTATTCGCAACTTCAGGTAA-TCCACCTCCGCCCGGC 1841 | || |||||| | || ||| |||| ||| | || | | || || ||| ||| Sbjct 492 CAGCGCTGACAATCTGGCCCCATTTAT-CGCCATTTGACACAGCTCGACACTCGCTTGGC 550 Query 1842 CTCGCCAACCCGCCTGCAACAACATCTCCATCCTTGATTGCATAGTCATAACCGCGCTCC 1901 | || | || ||||| |||| | ||||||||||||||| || || ||||| || ||| Sbjct 551 CGTGCGAGACCTCCTGCGACAATGTTTCCATCCTTGATTGCGTAATCGTAACCACGTTCC 610 Query 1902 GGACGACCTCTAGATGGCGCAATGTTTGGGTGGTGGCCTCCGACATCAAAGAAATCGGGT 1961 |||| |||| ||||| ||| ||| ||||||||||| | |||||||||| ||||| | Sbjct 611 GGACTTCCTCGTGATGGTACAACGTTCGGGTGGTGGCCGTCAACATCAAAGATATCGGCT 670 Query 1962 CGTCGGGATTGCTTCT----TTCTT-CCGAAATCCACAAAAGCATGGAGGTGAGTACCTC 2016 || ||| || || ||||| |||||||| ||||||||||| |||||||||| Sbjct 671 CGACGG-----CTCCTGAACTTCTTGCCGAAATCGCAGAAAGCATGGAGATGAGTACCTC 725 Query 2017 CATCAGAGTGATTTTCTCGTCCGACGATACACTCAGCTCCAAGCGCTGACAAATGGTCTG 2076 || |||| |||| ||||| || | ||| ||||| | ||| || | || | ||||| || Sbjct 726 CAGCAGAATGATCCTCTCGCCCAATGATGCACTCTGATCCCAGTGTAGAGAGATGGTTTG 785 Query 2077 AAACGGCCCAACCATCAAGCGTTCCGCACTGAGCGTAAGTGAGGAGGACATAACGAG 2133 |||||| ||| ||||||| |||||||| || || |||||||| ||||| |||| Sbjct 786 AAACGGACCATTCATCAAGTTCACCGCACTGCGCATATGTGAGGAGTACATACCGAG 842 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6872679869832