Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lasioglossum_20albipes_20[genbank_20GCA_5F000346575.1_202013-10-08] 12,599 sequences; 336,521,443 total letters Query= NC_033778.1 Length=111453 Score E Sequences producing significant alignments: (Bits) Value seq5192 96.9 2e-15 seq8225 84.2 2e-11 >seq5192 Length=725863 Score = 96.9 bits (106), Expect = 2e-15 Identities = 118/161 (73%), Gaps = 0/161 (0%) Strand=Plus/Plus Query 26371 GATGATGGTAGAATATGTAAAATTTGTTATAATGAAGAAATCGGTGTTGTATTTTTACCG 26430 || |||| || || || ||||||||||| || | |||| | || || ||||||||||| Sbjct 660923 GACGATGCGAGGATGTGCAAAATTTGTTACAACGGAGAATTAGGAGTAGTATTTTTACCA 660982 Query 26431 TGTGGTCATATTGTAGCATGTATTAAATGTGCACCCGGAATGATGAATTGTCCAGTCTGT 26490 ||||| ||||| ||||| ||| |||| ||||| || || |||| | ||| |||| || Sbjct 660983 TGTGGACATATAGTAGCTTGTGTTAAGTGTGCTCCTGGCATGACAACTTGCGCAGTATGC 661042 Query 26491 CGTAAACCAGTCAGCATGAATATACGAACATTCTTTTCATA 26531 | |||| || | |||| | ||| | ||||| ||||| Sbjct 661043 AGAGAACCTGTTACCATGGTCGTGCGAGCCTTCTTCTCATA 661083 >seq8225 Length=1235518 Score = 84.2 bits (92), Expect = 2e-11 Identities = 115/161 (71%), Gaps = 0/161 (0%) Strand=Plus/Minus Query 26371 GATGATGGTAGAATATGTAAAATTTGTTATAATGAAGAAATCGGTGTTGTATTTTTACCG 26430 || |||| || || || ||||||||||| || | ||| | || ||| ||||| |||| Sbjct 1061018 GACGATGCGAGGATGTGCAAAATTTGTTACAACGGAGAGTTAGGAGTTCTATTTCTACCT 1060959 Query 26431 TGTGGTCATATTGTAGCATGTATTAAATGTGCACCCGGAATGATGAATTGTCCAGTCTGT 26490 ||||| || || ||||| ||| | || ||||| || ||||||| | ||| |||| || Sbjct 1060958 TGTGGACACATAGTAGCTTGTGTGAAGTGTGCTCCTGGAATGACAACATGTGCAGTGTGC 1060899 Query 26491 CGTAAACCAGTCAGCATGAATATACGAACATTCTTTTCATA 26531 | | || || | ||||| | ||| | ||||| ||||| Sbjct 1060898 AGAGAGCCGGTTACCATGAGCGTGCGAGCTTTCTTCTCATA 1060858 Score = 82.4 bits (90), Expect = 5e-11 Identities = 80/103 (78%), Gaps = 0/103 (0%) Strand=Plus/Plus Query 26371 GATGATGGTAGAATATGTAAAATTTGTTATAATGAAGAAATCGGTGTTGTATTTTTACCG 26430 || ||||| || || || |||||||||||||| |||||| | || || |||||| ||| Sbjct 1013234 GAAGATGGGAGGATGTGCAAAATTTGTTATAACGAAGAATTAGGAGTATTATTTTCACCA 1013293 Query 26431 TGTGGTCATATTGTAGCATGTATTAAATGTGCACCCGGAATGA 26473 ||||| ||| | ||||| ||| |||| ||||| || | |||| Sbjct 1013294 TGTGGACATCTCGTAGCTTGTGTTAAGTGTGCTCCTGCCATGA 1013336 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 356470055505546