Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lasius_20niger_20[genbank_20GCA_5F001045655.1_202015-07-02]
36,804 sequences; 236,236,391 total letters
Query= AAMG01000911.1
Length=280
Score E
Sequences producing significant alignments: (Bits) Value
seq23980 217 2e-54
seq972 73.4 6e-11
>seq23980
Length=1355
Score = 217 bits (240), Expect = 2e-54
Identities = 222/293 (76%), Gaps = 49/293 (17%)
Strand=Plus/Minus
Query 12 TCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTG 71
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1220 TCCTTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTG 1161
Query 72 CCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAG---------------- 115
| |||| || | |||| |||||| ||||||||||||||
Sbjct 1160 C-TCAATCT-CGTGCGGCTAGAAGCCGCCTGTCCCTCTAAGAAGATTTGTTTGTACGTTG 1103
Query 116 ----------CCAGCCACC--AA--------CCATAGTCGAT-------GG---GGCTAT 145
|| |||| | || || | | |||| || | ||||
Sbjct 1102 GTAGTAAAAACCCGCCAGCCGAAGCCGGGGGCCTTCG-CGATACCATAAGGTACGCCTAT 1044
Query 146 TTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTA 205
|||||||| || |||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 1043 TTAGCAGGCTAGAGTCTCGTTCGTTATCGGAATTAACCAGACAAATCGCTCCACCAACTA 984
Query 206 AGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258
|||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 983 AGAACGGCCATGCACCACCACCCACCGAATCAAGAAAGAGCTATCAATCTGTC 931
>seq972
Length=36855
Score = 73.4 bits (80), Expect = 6e-11
Identities = 45/47 (96%), Gaps = 1/47 (2%)
Strand=Plus/Minus
Query 176 AATTAACCAGACAAATCACTCCACCAACTAAGAACGGCC-ATGCACC 221
||||||||||||||||| ||||||||||||||||||||| |||||||
Sbjct 28877 AATTAACCAGACAAATCGCTCCACCAACTAAGAACGGCCAATGCACC 28831
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 796515909924
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |