Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lasius_20niger_20[genbank_20GCA_5F001045655.1_202015-07-02] 36,804 sequences; 236,236,391 total letters Query= AAMG01001382.1 Length=124 Score E Sequences producing significant alignments: (Bits) Value seq11581 91.5 9e-17 seq20862 78.8 6e-13 seq972 71.6 8e-11 >seq11581 Length=4998 Score = 91.5 bits (100), Expect = 9e-17 Identities = 75/86 (87%), Gaps = 4/86 (5%) Strand=Plus/Plus Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98 |||||| | |||||||| |||| || ||||||||| ||||||||||| |||||||||| Sbjct 4856 TCCGAA-GACCTCACTAAATCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAG 4912 Query 99 GGCAGGGACGTAATACAACGCAAGCT 124 |||||||||||||| |||||| |||| Sbjct 4913 GGCAGGGACGTAAT-CAACGCGAGCT 4937 >seq20862 Length=1818 Score = 78.8 bits (86), Expect = 6e-13 Identities = 64/74 (86%), Gaps = 3/74 (4%) Strand=Plus/Plus Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108 |||||||| ||| || ||||||||| ||||||||||| |||||||||||||||||||| Sbjct 1745 CTCACTAAATAATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACG 1802 Query 109 TAATACAACGCAAG 122 |||| ||| || || Sbjct 1803 TAAT-CAATGCGAG 1815 >seq972 Length=36855 Score = 71.6 bits (78), Expect = 8e-11 Identities = 72/89 (81%), Gaps = 5/89 (6%) Strand=Plus/Plus Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTA--AGCGACGGGCGGG-GTGTACA 95 |||||| | |||||||| |||| |||||| || ||||| |||||| ||||||| Sbjct 16198 TCCGAA-GAACTCACTAAAATCATTCAATCGGTATTAGTAGCGATGGGCGGTTGTGTACA 16256 Query 96 AAGGGCAGGGACGTAATACAACGCAAGCT 124 ||||||||||||||||| |||||| |||| Sbjct 16257 AAGGGCAGGGACGTAAT-CAACGCGAGCT 16284 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 300696212720