Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lasius_20niger_20[genbank_20GCA_5F001045655.1_202015-07-02] 36,804 sequences; 236,236,391 total letters Query= AAMG01002120.1 Length=347 Score E Sequences producing significant alignments: (Bits) Value seq16553 179 7e-43 seq17423 178 3e-42 >seq16553 Length=2866 Score = 179 bits (198), Expect = 7e-43 Identities = 182/237 (77%), Gaps = 0/237 (0%) Strand=Plus/Minus Query 49 TTCACCGTGGTTGCCCTCGGCGTTGTTCAGGCCGAACAGGCGCTCCTTGATGATTCCATC 108 ||| ||||| ||||||||| | ||| | || |||||||| |||||||| | | || Sbjct 2809 TTCGCCGTGATTGCCCTCGTCATTGGTGAGACCGAACAGCCGCTCCTTCAGCCGGTCGTC 2750 Query 109 GCGCTCGTTCCACAGGGCCAGGCCCAGGCACCAACGTTGCGCCTTGTCACTGAACCCCGC 168 ||| | ||||||| |||||| ||||| |||||| | |||||| | ||| || || Sbjct 2749 GCGGCCATTCCACAAGGCCAGCCCCAGACACCAATAGAGATTCTTGTCGCCGAAGCCGGC 2690 Query 169 CAGGCCGTCCTCGCCCCAACGGTAGGCGCGGCTGCGTGCATGGTCATGGGGGAAGTAGGC 228 ||||||||| |||||||| |||||||||||| | || || || |||||| || Sbjct 2689 CAGGCCGTCTTCGCCCCACCGGTAGGCGCGGGCATGCGCGTGCTCGAAAGGGAAGGAGCG 2630 Query 229 CCAGGCGTCGCCATCGGCGCTGTAGTCTTCGCGCACCGTGCCCCATTGGCGTTCGCT 285 |||| | | |||||||||||| |||||||||||||||||||||||||| || ||||| Sbjct 2629 CCAGCCATTGCCATCGGCGCTATAGTCTTCGCGCACCGTGCCCCATTGACGCTCGCT 2573 >seq17423 Length=2606 Score = 178 bits (196), Expect = 3e-42 Identities = 199/265 (75%), Gaps = 6/265 (2%) Strand=Plus/Plus Query 49 TTCACCGTGGTTGCCCTCGGCGTTGTTCAGGCCGAACAGGCGCTCCTTGATGATTCCATC 108 ||| ||||| ||||||||| | ||| || |||||||| |||||||| | || ||| Sbjct 45 TTCGCCGTGATTGCCCTCGCCATTGGCGAGACCGAACAGCCGCTCCTTCAGAATCGGATC 104 Query 109 GCGCTCGTTCCACAGGGCCAGGCCCAGGCACCAACGTTGCGCCTTG---TCACTGAACCC 165 ||||||||||||||| ||||| |||||| ||| || | |||| || || Sbjct 105 CTTGCCGTTCCACAGGGCCACGCCCAAACACCAA---TGCAGCTGGCGATCACCAAAACC 161 Query 166 CGCCAGGCCGTCCTCGCCCCAACGGTAGGCGCGGCTGCGTGCATGGTCATGGGGGAAGTA 225 |||| |||||||||||||| || ||||||||| | |||| ||| |||||| || Sbjct 162 GCCCAGCCCGTCCTCGCCCCAGCGATAGGCGCGGGCCTGGGCATCGTCGAAGGGGAAATA 221 Query 226 GGCCCAGGCGTCGCCATCGGCGCTGTAGTCTTCGCGCACCGTGCCCCATTGGCGTTCGCT 285 |||||| | | ||| |||||||||||||| ||||||||||| ||||||||||||||||| Sbjct 222 AGCCCAGCCATTGCCGTCGGCGCTGTAGTCCTCGCGCACCGTACCCCATTGGCGTTCGCT 281 Query 286 CAGGTAGGGGCCCCACTCGCGCCAG 310 | || ||||| | || ||||| Sbjct 282 TAAATAAGGGCCGAAGTCCTGCCAG 306 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1007629015680