Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lasius_20niger_20[genbank_20GCA_5F001045655.1_202015-07-02] 36,804 sequences; 236,236,391 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq15721 381 2e-103 seq28078 345 1e-92 seq23948 286 1e-74 seq23980 224 3e-56 >seq15721 Length=3126 Score = 381 bits (422), Expect = 2e-103 Identities = 342/421 (81%), Gaps = 11/421 (3%) Strand=Plus/Plus Query 94 CTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAAT 153 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 1 CTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTGAT 60 Query 154 TCCCCGTTACCCGTTGATACCATGGTAGGCCACTATCCTACCATCGAAAGTTGATAGGGC 213 ||||||||||||||| |||||||||||| || |||||||||||||||||||| ||| Sbjct 61 TCCCCGTTACCCGTTACGACCATGGTAGGCGCGTAACCTACCATCGAAAGTTGATAAGGC 120 Query 214 AGAAATTTGAATGAACCATCGCCGGCTCAAGGCCATGCGAT--TCGTTAAGTTATTATGA 271 ||| | ||||| || | ||||||| || | || |||||| | ||||||| || Sbjct 121 AGACACTTGAAGGATACGTCGCCGGGACAGGCCCGTGCGATCAGCCCAAAGTTATACAGA 180 Query 272 ATCACCA-AGGA----GCCCCGAAGGGCGTTGGTTTTTTATCTAATAAATACACCCCT-T 325 |||||| | || | | ||| | || ||| |||| ||||||||| | | | | Sbjct 181 GTCACCACAAGAGACGGACACGAGGTCCGATGGGTTTTGTTCTAATAAAAGCGCTCGTCC 240 Query 326 CCGAA-GTCGG-GGTTTTTAGCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAG 383 ||||| ||||| | | | ||||||||||||||||||||| |||| |||||||| |||| Sbjct 241 CCGAAGGTCGGAGCTCTGCTGCATGTATTAGCTCTAGAATTGCCACAGTTATCCAAGTAG 300 Query 384 TAAGGTACTATCAAATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATA 443 ||| |||| ||| || ||| ||||||||||||||||||||||||| ||||| | | | Sbjct 301 TAAAGTACGATCCAAGGAACCATAACTGATTTAATGAGCCATTCGCGGTTTCGC-CTTGA 359 Query 444 GATTGCTTATACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCA 503 | || | ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 360 TACGGCATGTACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCA 419 Query 504 G 504 | Sbjct 420 G 420 >seq28078 Length=941 Score = 345 bits (382), Expect = 1e-92 Identities = 349/449 (78%), Gaps = 44/449 (10%) Strand=Plus/Plus Query 94 CTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAAT 153 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 1 CTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTGAT 60 Query 154 TCCCCGTTACCCGTTGATACCATGGTAGGCCACTATCCTACCATCGAAAGTTGATAGGGC 213 ||||||||||||||| |||||||||||| | ||||||||||| |||||||| ||| Sbjct 61 TCCCCGTTACCCGTTACAACCATGGTAGGCGCAGAACCTACCATCGACAGTTGATAAGGC 120 Query 214 AGAAATTTGAATGAACCATCGCCGGCTCAAGG-CCATGCGAT--TCGTTAAGTTATTATG 270 ||| ||||||| || | ||||||| | ||| || |||||| | |||||||| | Sbjct 121 AGACATTTGAAAGATGCGTCGCCGGTGCTAGGACCGTGCGATCAGCACAAAGTTATTCAG 180 Query 271 AATCACCAA-------GGAGCCCCGAAGGGCG----------------TTGGTTTTTTAT 307 | ||||||| || | |||| |||| |||| |||| || Sbjct 181 AGTCACCAAAATAAACGGTG-GACGAACGGCGAGCCGCCCGCCACCGATTGG-TTTTGAT 238 Query 308 CTAATAAATACACCCCTTCC----GAAGTCGGG---GTTTTTAGCATGTATTAGCTCTAG 360 |||||||| | ||||||| |||||| | ||| ||||||||||||||||| Sbjct 239 CTAATAAAAGCGTCCCTTCCATCACTGGTCGGGACTCTGTTTTGCATGTATTAGCTCTAG 298 Query 361 AATTACCACGGTTATCCATGTA---GTAAGGTACTATCAAATAAACGATAACTGATTTAA 417 ||||||||| |||||||| ||| || ||||| ||| ||| ||| ||||||||||||| Sbjct 299 AATTACCACAGTTATCCAAGTAAATGT-GGGTACAATCTAATGAACCATAACTGATTTAA 357 Query 418 TGAGCCATTCGCAGTTTCACTGTATAGATT--GCTTATACTTAGACATGCATGGCTTAAT 475 |||||||||||| ||||||| || ||| || | ||| |||||||||||||||||| Sbjct 358 TGAGCCATTCGCGGTTTCACCTTA---ATTCGGCATGCACTGAGACATGCATGGCTTAAT 414 Query 476 CTTTGAGACAAGCATATGACTACTGGCAG 504 ||||||||||||||||||||||||||||| Sbjct 415 CTTTGAGACAAGCATATGACTACTGGCAG 443 >seq23948 Length=1359 Score = 286 bits (316), Expect = 1e-74 Identities = 315/406 (78%), Gaps = 19/406 (5%) Strand=Plus/Plus Query 112 GTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGAT 171 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 1 GTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTGATTCCCCGTTACCCGTTGCA 60 Query 172 ACCATGGTAGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCA 231 |||||||||| || || |||||||| ||||||||||||||||| ||||||| || | Sbjct 61 ACCATGGTAGTCCTAGATACTACCATCAAAAGTTGATAGGGCAGACATTTGAAAGATCTG 120 Query 232 TCGCCGGCTCAAGGCCATGCGATTCGTTAAGTTAT-TA----TGAATCA--CCAAGGAGC 284 ||| ||| |||| |||| ||| || | ||||| || | || || || || | Sbjct 121 TCGTCGGTACAAGACCATACGA-TCTGCATGTTATCTAGAGTTCAACCAATATAACGATC 179 Query 285 CCCGAAGGGCGTTGGTTTTTTATCTAATAAATACACCCCTTCC-GAAG--TCGGGGTTT- 340 | || |||| |||| |||||||| ||| | || ||| || | ||| Sbjct 180 TTGCGATCGC-TTGG-TTTTAGCCTAATAAAAGCACATGTCCCATAAGGTTCATGTTTTA 237 Query 341 TTAGCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGT--ACTATCAAA 398 | |||||||||||||||||||||||||| |||||||| ||| | || || ||| || Sbjct 238 ATTGCATGTATTAGCTCTAGAATTACCACAGTTATCCAAGTA--ACTGTTAACGATCTAA 295 Query 399 TAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTA 458 ||| ||||||||| ||||||||| || || |||||||| | || | | | |||||| Sbjct 296 GGAACCATAACTGATATAATGAGCCTTTTGCGGTTTCACT-TTTAATTCGTGTGTACTTA 354 Query 459 GACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 |||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 355 GACATGCATGGCTTAATCTTTGAGACAAGCATATAACTACTGGCAG 400 >seq23980 Length=1355 Score = 224 bits (248), Expect = 3e-56 Identities = 152/169 (90%), Gaps = 1/169 (1%) Strand=Plus/Minus Query 1 GTACTCATTCCAATTACAAGACC-CAAAAGAGCCCTGTATCAGTATTTATTGTCACTACC 59 ||||||||||| ||||| | || | | ||| || ||||| ||||| | ||||||||| Sbjct 171 GTACTCATTCCGATTACGGGGCCTCGGATGAGTCCCGTATCGTTATTTTTCGTCACTACC 112 Query 60 TCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 119 |||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 111 TCCCCGTGCCGGGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 52 Query 120 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTT 168 ||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 51 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTGATTCCCCGTTACCCGTT 3 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1509844112384