Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Latrodectus_20hesperus_20[genbank_20GCA_5F000697925.1_202014-06-04] 151,814 sequences; 1,137,104,656 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq72498 118 2e-24 seq23847 113 8e-23 seq4198 104 4e-20 seq2154 98.7 2e-18 >seq72498 Length=2266 Score = 118 bits (130), Expect = 2e-24 Identities = 145/193 (75%), Gaps = 4/193 (2%) Strand=Plus/Plus Query 127 GCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGAC-CGCCGTA 185 ||||| |||||| ||||||||| | |||||||||||||||||||| | | | || | | Sbjct 167 GCATG-AATAATGGAATAGGACCT-CGGTTCTATTTTGTTGGTTTATGGAAAACGAGGAA 224 Query 186 ATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGA 245 |||||||| ||||| || |||||| | ||| | || |||| |||||||||| || Sbjct 225 ATGATTAAAAGGGACAGCCGGGGGCATTCGTACTGCGACGTTAGAGATGAAATTCTTAGA 284 Query 246 TTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAA 305 ||||| | ||||||||||| | || ||||| |||||| ||||||||| ||| Sbjct 285 CCGTCGCAAGACGATCTACTGCGAAATCATTTGCCAAGAATGTTTCCATTAATCA-AGAA 343 Query 306 CGAAAGTTAGGGG 318 ||||| ||| || Sbjct 344 AGAAAGCTAGAGG 356 >seq23847 Length=23704 Score = 113 bits (124), Expect = 8e-23 Identities = 171/238 (72%), Gaps = 18/238 (8%) Strand=Plus/Minus Query 79 TTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACATTAGCATGGAATAAT 138 ||||||||||||| |||| ||||||| || | || ||||| |||||| Sbjct 1304 TTTGAAAAAATTAAAGTGACCAAAGCATGCGTG---------AC----GCATG-AATAAT 1259 Query 139 AGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGAC-CGCCGTAATGATTAATAGG 197 ||| ||| | |||| ||||||||||||||| | | | || |||| |||||| ||| Sbjct 1258 GATATAAGACTTCCGGT-CTATTTTGTTGGTTTATGGAAAACGAGGTAAGGATTAAGAGG 1200 Query 198 GATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTG-AAGA 256 ||||| ||||| | ||||| | ||||||||||||||||| | ||| ||| Sbjct 1199 GATAGGCGGGGCCATTCGTATTGCGACGATAGAGGTGAAATTCTTGGGATCGTTGCAAGG 1140 Query 257 CTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTTA 314 | |||||||| |||||| || |||| || ||| || |||||| |||||||||||| Sbjct 1139 CAAACTACTGTGAAAGCATTTGCCAAAAATCTTTCCACTAATCA-AGAACGAAAGTTA 1083 >seq4198 Length=21195 Score = 104 bits (114), Expect = 4e-20 Identities = 175/247 (71%), Gaps = 11/247 (4%) Strand=Plus/Plus Query 74 TTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTG-CTCGAATACATTA-GCATG 131 |||||||||| ||||||||| |||||||||| | | ||||| || | | ||| Sbjct 5094 TTTACTTTGAGAAAATTAGATGGTTCAAAGCATAGATGACACATGAATA-ATGATGTATG 5152 Query 132 GAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATT 191 |||||| ||||||||| | || |||||| ||| | || |||||| || Sbjct 5153 CAATAATTGAATAGGACCTTTA-TTATATTTTTATGGAA------AACGAGGTAATGGTT 5205 Query 192 AATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATT 251 | ||||| || |||| | || ||| | | |||||||||||||||||| Sbjct 5206 CAGAGGGACAGCCGGGAGCGTTCGTACTGCGACGCTAGAGGTGAAATTCTTGGACCGTCG 5265 Query 252 GAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAG 311 ||||| ||||||||||||||| || ||||| |||||| ||||||||| |||||||| Sbjct 5266 CAAGACGAACTACTGCGAAAGCATTTGCCAAGAATGTTTCCATTAATCA-AGAACGAAAT 5324 Query 312 TTAGGGG 318 |||| || Sbjct 5325 TTAGAGG 5331 >seq2154 Length=28474 Score = 98.7 bits (108), Expect = 2e-18 Identities = 141/196 (72%), Gaps = 26/196 (13%) Strand=Plus/Minus Query 127 GCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGAC-CGCCGTA 185 |||||||||||| ||||||||| | |||||||||||||||||||| | | || ||| Sbjct 13493 GCATGGAATAATGGAATAGGACCT-CGGTTCTATTTTGTTGGTTTACGGAAAACGAGGTA 13435 Query 186 ATGATTAATAGGGATAGTCGGGG---GTGTCAGTATTCAATTGTCAGAGGTGAAATTCTT 242 |||||||| |||||||| ||||| ||||| | ||||||| | || | Sbjct 13434 ATGATTAAGAGGGATAGCCGGGGACTGTGTC-----------GCAAGAGGTGGA--TCGT 13388 Query 243 GGATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGT 302 | | || | |||| |||||||||| || |||| |||||| ||| ||||| Sbjct 13387 AGCT-------AGCCGAACTTCTGCGAAAGCATTTGCCAAAAATGTTTCCATAAATCA-A 13336 Query 303 GAACGAAAGTTAGGGG 318 ||||||||||||| || Sbjct 13335 GAACGAAAGTTAGAGG 13320 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 913810598272