Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Latrodectus_20hesperus_20[genbank_20GCA_5F000697925.1_202014-06-04] 151,814 sequences; 1,137,104,656 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq6685 212 1e-52 seq97454 138 2e-30 seq2154 125 1e-26 >seq6685 Length=68169 Score = 212 bits (234), Expect = 1e-52 Identities = 197/245 (80%), Gaps = 4/245 (2%) Strand=Plus/Minus Query 16 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTC 75 ||| |||||| ||||||| |||| ||||||||| |||||| |||||||||||||||| || Sbjct 30693 TCATTGTAGCACGCGTGCAGCCCCGAACATCTATGGGCATTACAGACCTGTTATTGC-TC 30635 Query 76 AAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAG-CCACCAACCATAGTC 134 || | |||| | || | |||||||||||||| | || | || | || Sbjct 30634 TGTCT-CGTGCGGCTAAACACCGCTTGTCCCTCTAAGAAGAACGTCCGACTACAAGGATC 30576 Query 135 G-ATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCA 193 | | | |||||||| ||| || |||||||||||||||||||| |||||||||||||| Sbjct 30575 GGAAACGTCTATTTAGTAGGCTAGAGTCTCGTTCGTTATCGGAATAAACCAGACAAATCA 30516 Query 194 CTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAAT 253 |||||||||||||||||| ||||||||||| ||||| ||||||||||||||||| | ||| Sbjct 30515 CTCCACCAACTAAGAACGACCATGCACCACAACCCACAGAATCAAGAAAGAGCTCTTAAT 30456 Query 254 CTGTC 258 ||||| Sbjct 30455 CTGTC 30451 >seq97454 Length=7402 Score = 138 bits (152), Expect = 2e-30 Identities = 102/118 (86%), Gaps = 1/118 (1%) Strand=Plus/Minus Query 142 CTATTTAGCAGGTTA-AGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACC 200 |||||||| ||| || | ||| ||||||| |||||||| | ||||||||||| ||||||| Sbjct 4461 CTATTTAGTAGGCTAGAAGTCCCGTTCGTCATCGGAATAAGCCAGACAAATCGCTCCACC 4402 Query 201 AACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 ||||||||| | ||||||||||| ||||| ||||||||||||||||| | ||| |||| Sbjct 4401 AACTAAGAAAGACCATGCACCACAACCCACAGAATCAAGAAAGAGCTCTTAATTTGTC 4344 >seq2154 Length=28474 Score = 125 bits (138), Expect = 1e-26 Identities = 98/117 (84%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 142 CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCA 201 || ||| | ||| || ||||||||||| |||||||| ||||||||||||| || | ||| Sbjct 12961 CTGTTTGGTAGGCTAGAGTCTCGTTCGTCATCGGAATAAACCAGACAAATCGCTTCCCCA 13020 Query 202 ACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 |||| |||| ||||||||||| ||||| ||||||||||| ||||| | |||||||| Sbjct 13021 ACTAGAAACGACCATGCACCACAACCCACAGAATCAAGAAGGAGCTCTTAATCTGTC 13077 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795628147734