Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Latrodectus_20hesperus_20[genbank_20GCA_5F000697925.1_202014-06-04] 151,814 sequences; 1,137,104,656 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq4198 396 9e-108 seq5340 123 8e-26 seq2823 123 8e-26 seq4561 120 1e-24 seq8143 116 1e-23 seq25317 113 1e-22 seq993 105 2e-20 seq13644 96.9 1e-17 seq33482 75.2 4e-11 >seq4198 Length=21195 Score = 396 bits (438), Expect = 9e-108 Identities = 357/443 (81%), Gaps = 18/443 (4%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 ||||| |||||| ||| ||||||| ||| |||| | ||||||||||||||||||| Sbjct 8914 CTTTTACTCTACGCGAGGTTTCTGTCCTCGCTGAGCTCGCCTTAGGACACCTGCGTTACC 8855 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 ||| |||||| | ||||||||| |||||||| ||||| |||| || |||||| Sbjct 8854 TTTTGACAGATATACCGCCCCAGTTAAACTCCCTGCCTGAGGCTGTCCTCGGAGCGGATC 8795 Query 127 GGCCCG--------CGAA--GGACCTTAACGCCAGAAAA-TGGTCGGTGAAGACCAGT-T 174 | ||| ||| || ||| || ||||| ||||| | |||| | | Sbjct 8794 GCGCCGGGTGTCTTCGACCCGGCGCTTTGTGCTAGAAACGTGGTCCCTTCGGACCGCTCT 8735 Query 175 CCGCTTCATTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCG----CCG 230 |||||||| || | |||||||| ||||| | |||||||||||||||| || ||| Sbjct 8734 CCGCTTCACCGAGTCAGTAAAAACACGATGAAAGTAGTGGTATTTCACTGACGATGGCCG 8675 Query 231 AAACGG-CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCA 289 |||| ||||| ||||| |||| ||| ||| ||| ||||||| |||| ||||||||||| Sbjct 8674 AAACCATCTCCCTCTTATACTACGCCTTTCATGTCTTTTCACAGAGTCAGACTAGAGTCA 8615 Query 290 AGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTT 349 |||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 8614 AGCTCATCAGGGTCTTCTTTCCCCGCTGATTCTGCCAAGCCCGTTCCCTTGGCTGTGGTT 8555 Query 350 TCGCTAGATAGTAGATAGGGACAGT-GGGAATCTCGTTAATCCATTCATGCGCGTCACTA 408 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 8554 TCGCTAGATAGTAGATAGGGACAGTAGGGAATCTCGTTAATCCATTCATGCGCGTCACTA 8495 Query 409 ATTAGATGACGAGGCATTTGGCT 431 ||| ||||||||||||||||||| Sbjct 8494 ATTGGATGACGAGGCATTTGGCT 8472 >seq5340 Length=17360 Score = 123 bits (136), Expect = 8e-26 Identities = 76/80 (95%), Gaps = 1/80 (1%) Strand=Plus/Minus Query 454 TCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCA 513 ||||||| |||||||| |||||| |||||||||||||||||||||||||||||||||||| Sbjct 12297 TCCCGCC-TTTACCCGAGCTTGGATGAATTTCTTCACTTTGACATTCAGAGCACTGGGCA 12239 Query 514 GAAATCACATTGCGTCAACA 533 ||||||||||||||||| || Sbjct 12238 GAAATCACATTGCGTCAGCA 12219 Score = 118 bits (130), Expect = 3e-24 Identities = 75/80 (94%), Gaps = 1/80 (1%) Strand=Plus/Minus Query 454 TCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCA 513 ||||||| |||||||| |||||| |||||||||||||||| ||||||||||||||||||| Sbjct 6145 TCCCGCC-TTTACCCGAGCTTGGATGAATTTCTTCACTTTCACATTCAGAGCACTGGGCA 6087 Query 514 GAAATCACATTGCGTCAACA 533 ||||||||||||||||| || Sbjct 6086 GAAATCACATTGCGTCAGCA 6067 >seq2823 Length=27729 Score = 123 bits (136), Expect = 8e-26 Identities = 73/76 (96%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 458 GCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAA 517 |||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 2279 GCCGTTTACCCGAGCTTGGATGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAA 2338 Query 518 TCACATTGCGTCAACA 533 ||||||||||||| || Sbjct 2339 TCACATTGCGTCAGCA 2354 >seq4561 Length=29000 Score = 120 bits (132), Expect = 1e-24 Identities = 76/81 (94%), Gaps = 1/81 (1%) Strand=Plus/Plus Query 454 TCCCGCCGTTT-ACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGC 512 ||||||| ||| ||||| |||||| ||||||||||||||||||||||||||||||||||| Sbjct 9096 TCCCGCCATTTTACCCGAGCTTGGATGAATTTCTTCACTTTGACATTCAGAGCACTGGGC 9155 Query 513 AGAAATCACATTGCGTCAACA 533 |||||||||||||||||| || Sbjct 9156 AGAAATCACATTGCGTCAGCA 9176 >seq8143 Length=35606 Score = 116 bits (128), Expect = 1e-23 Identities = 69/72 (96%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 462 TTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCAC 521 |||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 7720 TTTACCCGAGCTTGGATGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCAC 7661 Query 522 ATTGCGTCAACA 533 ||||||||| || Sbjct 7660 ATTGCGTCAGCA 7649 >seq25317 Length=10313 Score = 113 bits (124), Expect = 1e-22 Identities = 68/72 (94%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 462 TTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCAC 521 ||| |||| |||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 606 TTTTCCCGAGCTTGGATGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCAC 665 Query 522 ATTGCGTCAACA 533 ||||||||| || Sbjct 666 ATTGCGTCAGCA 677 >seq993 Length=79258 Score = 105 bits (116), Expect = 2e-20 Identities = 66/71 (93%), Gaps = 0/71 (0%) Strand=Plus/Minus Query 463 TTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACA 522 ||||| | |||||| |||| |||||||||||||||||||||||||||||||||||||||| Sbjct 28182 TTACCAGAGCTTGGATGAACTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACA 28123 Query 523 TTGCGTCAACA 533 |||||||| || Sbjct 28122 TTGCGTCAGCA 28112 >seq13644 Length=27084 Score = 96.9 bits (106), Expect = 1e-17 Identities = 62/68 (91%), Gaps = 0/68 (0%) Strand=Plus/Plus Query 458 GCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAA 517 ||||||||||| | ||||| ||||||||||||||||||||||||| ||||| |||||||| Sbjct 11847 GCCGTTTACCCACTCTTGGGTGAATTTCTTCACTTTGACATTCAGGGCACTTGGCAGAAA 11906 Query 518 TCACATTG 525 ||| |||| Sbjct 11907 TCATATTG 11914 >seq33482 Length=20684 Score = 75.2 bits (82), Expect = 4e-11 Identities = 52/59 (88%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 458 GCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAA 516 ||| |||||||| ||||| |||||||||||||||| ||||| ||||||||||||||| Sbjct 9329 GCCTTTTACCCGAGCTTGAATGAATTTCTTCACTTTTCCATTCGGAGCACTGGGCAGAA 9271 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1632717537472